avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Sp3 | mm10_v2_chr2_-_72980402_72980471 | 0.31 | 6.8e-02 | Click! |
Klf4 | mm10_v2_chr4_-_55532453_55532485 | 0.09 | 6.1e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr7_-_17062384 Show fit | 20.64 |
ENSMUST00000153833.1
ENSMUST00000108492.2 |
hypoxia inducible factor 3, alpha subunit |
|
chr7_-_38107490 Show fit | 18.08 |
ENSMUST00000108023.3
|
cyclin E1 |
|
chr11_+_62077018 Show fit | 17.87 |
ENSMUST00000092415.5
|
sperm antigen with calponin homology and coiled-coil domains 1 |
|
chrX_-_7967817 Show fit | 16.22 |
ENSMUST00000033502.7
|
GATA binding protein 1 |
|
chr11_+_74619594 Show fit | 15.79 |
ENSMUST00000100866.2
|
RIKEN cDNA E130309D14 gene |
|
chr15_-_103255433 Show fit | 14.52 |
ENSMUST00000075192.6
|
nuclear factor, erythroid derived 2 |
|
chr7_-_45211877 Show fit | 14.23 |
ENSMUST00000033057.7
|
dickkopf-like 1 |
|
chr11_-_116581446 Show fit | 14.19 |
ENSMUST00000082152.4
|
ubiquitin-conjugating enzyme E2O |
|
chr4_-_43040279 Show fit | 14.10 |
ENSMUST00000107958.1
ENSMUST00000107959.1 ENSMUST00000152846.1 |
family with sequence similarity 214, member B |
|
chrX_+_73639414 Show fit | 13.96 |
ENSMUST00000019701.8
|
dual specificity phosphatase 9 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.7 | 51.8 | GO:0006270 | DNA replication initiation(GO:0006270) |
2.1 | 36.0 | GO:0061179 | negative regulation of insulin secretion involved in cellular response to glucose stimulus(GO:0061179) |
0.6 | 32.9 | GO:0051225 | spindle assembly(GO:0051225) |
0.7 | 32.2 | GO:0043044 | ATP-dependent chromatin remodeling(GO:0043044) |
1.3 | 30.6 | GO:0051016 | barbed-end actin filament capping(GO:0051016) |
1.0 | 30.5 | GO:0006783 | heme biosynthetic process(GO:0006783) |
3.7 | 29.9 | GO:0061092 | regulation of phospholipid translocation(GO:0061091) positive regulation of phospholipid translocation(GO:0061092) |
3.7 | 29.5 | GO:0010032 | meiotic chromosome condensation(GO:0010032) |
1.0 | 27.5 | GO:0034508 | centromere complex assembly(GO:0034508) |
8.7 | 26.1 | GO:0060217 | hemangioblast cell differentiation(GO:0060217) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 61.4 | GO:0017053 | transcriptional repressor complex(GO:0017053) |
0.8 | 41.7 | GO:0000307 | cyclin-dependent protein kinase holoenzyme complex(GO:0000307) |
0.6 | 41.6 | GO:0005844 | polysome(GO:0005844) |
0.4 | 38.6 | GO:0005819 | spindle(GO:0005819) |
3.8 | 38.2 | GO:0000796 | condensin complex(GO:0000796) |
0.5 | 36.3 | GO:0022625 | cytosolic large ribosomal subunit(GO:0022625) |
1.4 | 36.0 | GO:0005680 | anaphase-promoting complex(GO:0005680) |
0.6 | 34.3 | GO:0005657 | replication fork(GO:0005657) |
0.5 | 33.3 | GO:0000776 | kinetochore(GO:0000776) |
0.5 | 32.2 | GO:0000922 | spindle pole(GO:0000922) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 53.2 | GO:0003682 | chromatin binding(GO:0003682) |
0.3 | 51.1 | GO:0008017 | microtubule binding(GO:0008017) |
0.5 | 47.3 | GO:0003777 | microtubule motor activity(GO:0003777) |
1.2 | 45.7 | GO:0016538 | cyclin-dependent protein serine/threonine kinase regulator activity(GO:0016538) |
0.3 | 45.3 | GO:0003735 | structural constituent of ribosome(GO:0003735) |
0.9 | 45.2 | GO:0043027 | cysteine-type endopeptidase inhibitor activity involved in apoptotic process(GO:0043027) |
0.4 | 41.8 | GO:0005200 | structural constituent of cytoskeleton(GO:0005200) |
0.6 | 37.3 | GO:0070888 | E-box binding(GO:0070888) |
1.0 | 35.4 | GO:0043539 | protein serine/threonine kinase activator activity(GO:0043539) |
0.1 | 35.3 | GO:0005096 | GTPase activator activity(GO:0005096) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.7 | 109.6 | PID PLK1 PATHWAY | PLK1 signaling events |
0.7 | 63.7 | PID MYC ACTIV PATHWAY | Validated targets of C-MYC transcriptional activation |
1.4 | 60.2 | PID AURORA B PATHWAY | Aurora B signaling |
0.5 | 52.6 | PID CMYB PATHWAY | C-MYB transcription factor network |
0.6 | 52.0 | PID E2F PATHWAY | E2F transcription factor network |
2.8 | 44.8 | SA REG CASCADE OF CYCLIN EXPR | Expression of cyclins regulates progression through the cell cycle by activating cyclin-dependent kinases. |
0.8 | 42.0 | SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES | Genes related to regulation of the actin cytoskeleton |
1.6 | 36.2 | PID HIF1A PATHWAY | Hypoxic and oxygen homeostasis regulation of HIF-1-alpha |
0.6 | 30.9 | PID MAPK TRK PATHWAY | Trk receptor signaling mediated by the MAPK pathway |
0.5 | 26.9 | SIG PIP3 SIGNALING IN B LYMPHOCYTES | Genes related to PIP3 signaling in B lymphocytes |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.1 | 111.5 | REACTOME MITOTIC PROMETAPHASE | Genes involved in Mitotic Prometaphase |
0.7 | 69.0 | REACTOME PEPTIDE CHAIN ELONGATION | Genes involved in Peptide chain elongation |
0.6 | 65.9 | REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION | Genes involved in Factors involved in megakaryocyte development and platelet production |
2.9 | 58.1 | REACTOME G1 S SPECIFIC TRANSCRIPTION | Genes involved in G1/S-Specific Transcription |
0.2 | 47.1 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.5 | 46.4 | REACTOME CHROMOSOME MAINTENANCE | Genes involved in Chromosome Maintenance |
1.4 | 43.0 | REACTOME ACTIVATION OF THE PRE REPLICATIVE COMPLEX | Genes involved in Activation of the pre-replicative complex |
1.5 | 39.3 | REACTOME KINESINS | Genes involved in Kinesins |
0.8 | 36.4 | REACTOME RECYCLING PATHWAY OF L1 | Genes involved in Recycling pathway of L1 |
1.1 | 35.1 | REACTOME BASIGIN INTERACTIONS | Genes involved in Basigin interactions |