avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Klf6 | mm10_v2_chr13_+_5861489_5861501 | 0.44 | 7.9e-03 | Click! |
Patz1 | mm10_v2_chr11_+_3290300_3290457 | 0.41 | 1.4e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr7_-_142659482 Show fit | 2.80 |
ENSMUST00000121128.1
|
insulin-like growth factor 2 |
|
chr4_+_115057410 Show fit | 2.05 |
ENSMUST00000136946.1
|
T cell acute lymphocytic leukemia 1 |
|
chrX_+_13071470 Show fit | 1.91 |
ENSMUST00000169594.2
|
ubiquitin specific peptidase 9, X chromosome |
|
chr7_+_25268387 Show fit | 1.63 |
ENSMUST00000169392.1
|
capicua homolog (Drosophila) |
|
chrX_+_159255919 Show fit | 1.40 |
ENSMUST00000112492.1
|
ribosomal protein S6 kinase polypeptide 3 |
|
chr11_-_96005872 Show fit | 1.37 |
ENSMUST00000013559.2
|
insulin-like growth factor 2 mRNA binding protein 1 |
|
chr6_-_86669136 Show fit | 1.37 |
ENSMUST00000001184.7
|
MAX dimerization protein 1 |
|
chr7_-_142657466 Show fit | 1.34 |
ENSMUST00000097936.2
ENSMUST00000000033.5 |
insulin-like growth factor 2 |
|
chr14_+_31019183 Show fit | 1.33 |
ENSMUST00000052239.5
|
polybromo 1 |
|
chr2_-_38287174 Show fit | 1.31 |
ENSMUST00000130472.1
|
DENN/MADD domain containing 1A |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 5.1 | GO:0038028 | insulin receptor signaling pathway via phosphatidylinositol 3-kinase(GO:0038028) |
0.7 | 3.0 | GO:0003349 | epicardium-derived cardiac endothelial cell differentiation(GO:0003349) |
0.7 | 2.8 | GO:1904800 | regulation of neuron remodeling(GO:1904799) negative regulation of neuron remodeling(GO:1904800) |
0.9 | 2.6 | GO:0060217 | hemangioblast cell differentiation(GO:0060217) |
0.1 | 2.6 | GO:0015816 | glycine transport(GO:0015816) |
0.3 | 2.3 | GO:1902746 | regulation of lens fiber cell differentiation(GO:1902746) |
0.1 | 2.2 | GO:0042789 | mRNA transcription from RNA polymerase II promoter(GO:0042789) |
0.2 | 2.0 | GO:0070294 | renal sodium ion absorption(GO:0070294) |
0.2 | 1.9 | GO:0010587 | miRNA catabolic process(GO:0010587) |
0.1 | 1.9 | GO:2000052 | positive regulation of non-canonical Wnt signaling pathway(GO:2000052) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 6.6 | GO:0016604 | nuclear body(GO:0016604) |
0.0 | 3.6 | GO:0032993 | protein-DNA complex(GO:0032993) |
0.1 | 3.1 | GO:1990391 | DNA repair complex(GO:1990391) |
0.0 | 3.1 | GO:0005905 | clathrin-coated pit(GO:0005905) |
0.1 | 2.9 | GO:0090544 | BAF-type complex(GO:0090544) |
0.0 | 2.8 | GO:0005681 | spliceosomal complex(GO:0005681) |
0.0 | 2.7 | GO:0036126 | sperm flagellum(GO:0036126) |
0.9 | 2.6 | GO:0033193 | Lsd1/2 complex(GO:0033193) |
0.0 | 2.6 | GO:0017053 | transcriptional repressor complex(GO:0017053) |
0.2 | 2.5 | GO:0097539 | ciliary transition fiber(GO:0097539) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 16.9 | GO:0003682 | chromatin binding(GO:0003682) |
0.0 | 6.6 | GO:0005096 | GTPase activator activity(GO:0005096) |
0.0 | 5.5 | GO:0017137 | Rab GTPase binding(GO:0017137) |
0.1 | 5.2 | GO:0043539 | protein serine/threonine kinase activator activity(GO:0043539) |
0.1 | 4.3 | GO:0070888 | E-box binding(GO:0070888) |
0.0 | 4.1 | GO:0001078 | transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001078) |
0.2 | 3.9 | GO:0042800 | histone methyltransferase activity (H3-K4 specific)(GO:0042800) |
0.1 | 3.4 | GO:0043027 | cysteine-type endopeptidase inhibitor activity involved in apoptotic process(GO:0043027) |
0.0 | 2.5 | GO:0005089 | Rho guanyl-nucleotide exchange factor activity(GO:0005089) |
0.2 | 2.4 | GO:0008046 | axon guidance receptor activity(GO:0008046) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 5.0 | PID RHOA REG PATHWAY | Regulation of RhoA activity |
0.1 | 4.7 | PID AJDISS 2PATHWAY | Posttranslational regulation of adherens junction stability and dissassembly |
0.1 | 4.2 | ST ERK1 ERK2 MAPK PATHWAY | ERK1/ERK2 MAPK Pathway |
0.1 | 3.9 | PID PLK1 PATHWAY | PLK1 signaling events |
0.0 | 2.6 | PID HDAC CLASSII PATHWAY | Signaling events mediated by HDAC Class II |
0.0 | 2.6 | PID BETA CATENIN NUC PATHWAY | Regulation of nuclear beta catenin signaling and target gene transcription |
0.1 | 2.5 | PID BETA CATENIN DEG PATHWAY | Degradation of beta catenin |
0.0 | 2.3 | PID IL2 STAT5 PATHWAY | IL2 signaling events mediated by STAT5 |
0.0 | 2.3 | PID TELOMERASE PATHWAY | Regulation of Telomerase |
0.0 | 2.1 | PID ERBB1 INTERNALIZATION PATHWAY | Internalization of ErbB1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.9 | REACTOME RECYCLING PATHWAY OF L1 | Genes involved in Recycling pathway of L1 |
0.0 | 3.3 | REACTOME NRAGE SIGNALS DEATH THROUGH JNK | Genes involved in NRAGE signals death through JNK |
0.2 | 3.2 | REACTOME REGULATION OF INSULIN LIKE GROWTH FACTOR IGF ACTIVITY BY INSULIN LIKE GROWTH FACTOR BINDING PROTEINS IGFBPS | Genes involved in Regulation of Insulin-like Growth Factor (IGF) Activity by Insulin-like Growth Factor Binding Proteins (IGFBPs) |
0.0 | 3.2 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.1 | 2.7 | REACTOME VOLTAGE GATED POTASSIUM CHANNELS | Genes involved in Voltage gated Potassium channels |
0.0 | 2.2 | REACTOME AMINO ACID TRANSPORT ACROSS THE PLASMA MEMBRANE | Genes involved in Amino acid transport across the plasma membrane |
0.0 | 2.1 | REACTOME ION TRANSPORT BY P TYPE ATPASES | Genes involved in Ion transport by P-type ATPases |
0.0 | 2.0 | REACTOME PEPTIDE LIGAND BINDING RECEPTORS | Genes involved in Peptide ligand-binding receptors |
0.0 | 1.8 | REACTOME INTERACTION BETWEEN L1 AND ANKYRINS | Genes involved in Interaction between L1 and Ankyrins |
0.0 | 1.8 | REACTOME NONSENSE MEDIATED DECAY ENHANCED BY THE EXON JUNCTION COMPLEX | Genes involved in Nonsense Mediated Decay Enhanced by the Exon Junction Complex |