avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Lef1 | mm10_v2_chr3_+_131112785_131112803 | 0.01 | 9.3e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr2_+_70474923 Show fit | 2.56 |
ENSMUST00000100043.2
|
trans-acting transcription factor 5 |
|
chr11_+_108920800 Show fit | 2.38 |
ENSMUST00000140821.1
|
axin2 |
|
chr13_-_62858364 Show fit | 1.60 |
ENSMUST00000021907.7
|
fructose bisphosphatase 2 |
|
chr6_-_52240841 Show fit | 1.57 |
ENSMUST00000121043.1
|
homeobox A10 |
|
chr10_-_128960965 Show fit | 1.55 |
ENSMUST00000026398.3
|
methyltransferase like 7B |
|
chr11_-_26210553 Show fit | 1.53 |
ENSMUST00000101447.3
|
RIKEN cDNA 5730522E02 gene |
|
chr11_+_96271453 Show fit | 1.53 |
ENSMUST00000000010.8
ENSMUST00000174042.1 |
homeobox B9 |
|
chr7_-_70366735 Show fit | 1.42 |
ENSMUST00000089565.5
|
nuclear receptor subfamily 2, group F, member 2 |
|
chr8_+_45507768 Show fit | 1.39 |
ENSMUST00000067065.7
ENSMUST00000098788.3 ENSMUST00000067107.7 ENSMUST00000171337.2 ENSMUST00000138049.1 ENSMUST00000141039.1 |
sorbin and SH3 domain containing 2 |
|
chr14_-_70524068 Show fit | 1.28 |
ENSMUST00000022692.3
|
surfactant associated protein C |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.6 | 4.7 | GO:0061181 | regulation of chondrocyte development(GO:0061181) |
0.1 | 3.5 | GO:0060065 | uterus development(GO:0060065) |
0.3 | 2.2 | GO:0070494 | regulation of thrombin receptor signaling pathway(GO:0070494) negative regulation of thrombin receptor signaling pathway(GO:0070495) |
0.1 | 2.2 | GO:0036342 | post-anal tail morphogenesis(GO:0036342) |
0.1 | 2.2 | GO:0010107 | potassium ion import(GO:0010107) |
0.1 | 1.7 | GO:0072307 | metanephric nephron tubule epithelial cell differentiation(GO:0072257) regulation of metanephric nephron tubule epithelial cell differentiation(GO:0072307) |
0.1 | 1.7 | GO:0090336 | positive regulation of brown fat cell differentiation(GO:0090336) |
0.0 | 1.6 | GO:0046426 | negative regulation of JAK-STAT cascade(GO:0046426) negative regulation of STAT cascade(GO:1904893) |
0.1 | 1.5 | GO:0010650 | positive regulation of cell communication by electrical coupling(GO:0010650) positive regulation of membrane depolarization during cardiac muscle cell action potential(GO:1900827) |
0.3 | 1.4 | GO:0060849 | regulation of transcription involved in lymphatic endothelial cell fate commitment(GO:0060849) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.8 | GO:0009925 | basal plasma membrane(GO:0009925) |
0.0 | 2.6 | GO:0031463 | Cul3-RING ubiquitin ligase complex(GO:0031463) |
0.0 | 2.4 | GO:0005913 | cell-cell adherens junction(GO:0005913) |
0.1 | 1.6 | GO:0031258 | lamellipodium membrane(GO:0031258) |
0.0 | 1.6 | GO:0000922 | spindle pole(GO:0000922) |
0.1 | 1.5 | GO:0014731 | spectrin-associated cytoskeleton(GO:0014731) |
0.1 | 1.3 | GO:0097208 | alveolar lamellar body(GO:0097208) |
0.0 | 1.2 | GO:0005581 | collagen trimer(GO:0005581) |
0.1 | 1.1 | GO:0070369 | beta-catenin-TCF7L2 complex(GO:0070369) |
0.0 | 1.1 | GO:0016235 | aggresome(GO:0016235) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 4.8 | GO:0070411 | I-SMAD binding(GO:0070411) |
0.5 | 2.2 | GO:0005008 | hepatocyte growth factor-activated receptor activity(GO:0005008) |
0.1 | 2.2 | GO:0005242 | inward rectifier potassium channel activity(GO:0005242) |
0.0 | 1.6 | GO:0030507 | spectrin binding(GO:0030507) |
0.0 | 1.6 | GO:0004860 | protein kinase inhibitor activity(GO:0004860) |
0.1 | 1.5 | GO:0050308 | sugar-phosphatase activity(GO:0050308) |
0.1 | 1.4 | GO:0001972 | retinoic acid binding(GO:0001972) |
0.1 | 1.3 | GO:0015271 | outward rectifier potassium channel activity(GO:0015271) |
0.1 | 1.2 | GO:0048019 | receptor antagonist activity(GO:0048019) |
0.0 | 1.2 | GO:0042805 | actinin binding(GO:0042805) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 5.2 | PID BETA CATENIN DEG PATHWAY | Degradation of beta catenin |
0.0 | 4.9 | PID BETA CATENIN NUC PATHWAY | Regulation of nuclear beta catenin signaling and target gene transcription |
0.1 | 3.1 | PID HDAC CLASSIII PATHWAY | Signaling events mediated by HDAC Class III |
0.1 | 2.9 | PID ARF6 PATHWAY | Arf6 signaling events |
0.0 | 2.6 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.0 | 2.5 | PID HNF3A PATHWAY | FOXA1 transcription factor network |
0.1 | 1.9 | PID INTEGRIN A9B1 PATHWAY | Alpha9 beta1 integrin signaling events |
0.1 | 1.5 | PID WNT SIGNALING PATHWAY | Wnt signaling network |
0.0 | 1.2 | NABA COLLAGENS | Genes encoding collagen proteins |
0.0 | 1.0 | PID INTEGRIN5 PATHWAY | Beta5 beta6 beta7 and beta8 integrin cell surface interactions |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 2.2 | REACTOME SEMA4D IN SEMAPHORIN SIGNALING | Genes involved in Sema4D in semaphorin signaling |
0.0 | 2.2 | REACTOME INHIBITION OF VOLTAGE GATED CA2 CHANNELS VIA GBETA GAMMA SUBUNITS | Genes involved in Inhibition of voltage gated Ca2+ channels via Gbeta/gamma subunits |
0.0 | 1.7 | REACTOME INTERACTION BETWEEN L1 AND ANKYRINS | Genes involved in Interaction between L1 and Ankyrins |
0.1 | 1.6 | REACTOME SIGNALING BY HIPPO | Genes involved in Signaling by Hippo |
0.0 | 1.4 | REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION | Genes involved in Transcriptional Regulation of White Adipocyte Differentiation |
0.0 | 1.4 | REACTOME MEIOTIC SYNAPSIS | Genes involved in Meiotic Synapsis |
0.0 | 1.2 | REACTOME COLLAGEN FORMATION | Genes involved in Collagen formation |
0.0 | 1.0 | REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY | Genes involved in Nuclear Receptor transcription pathway |
0.0 | 1.0 | REACTOME INTEGRIN CELL SURFACE INTERACTIONS | Genes involved in Integrin cell surface interactions |
0.1 | 0.9 | REACTOME TANDEM PORE DOMAIN POTASSIUM CHANNELS | Genes involved in Tandem pore domain potassium channels |