avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Lhx2 | mm10_v2_chr2_+_38339258_38339281 | -0.79 | 1.3e-08 | Click! |
Hoxc5 | mm10_v2_chr15_+_103013815_103013815 | -0.45 | 5.8e-03 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr12_+_104338372 Show fit | 10.56 |
ENSMUST00000101078.5
ENSMUST00000043058.3 |
serine (or cysteine) peptidase inhibitor, clade A, member 3M serine (or cysteine) peptidase inhibitor, clade A, member 3K |
|
chr5_-_87254804 Show fit | 8.01 |
ENSMUST00000075858.3
|
UDP glucuronosyltransferase 2 family, polypeptide B37 |
|
chr7_-_14492926 Show fit | 7.73 |
ENSMUST00000108524.3
|
sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 7 |
|
chr4_-_61674094 Show fit | 7.71 |
ENSMUST00000098040.3
|
major urinary protein 18 |
|
chr4_-_60499332 Show fit | 7.66 |
ENSMUST00000135953.1
|
major urinary protein 1 |
|
chr4_-_60222580 Show fit | 6.84 |
ENSMUST00000095058.4
ENSMUST00000163931.1 |
major urinary protein 8 |
|
chr4_-_60582152 Show fit | 6.46 |
ENSMUST00000098047.2
|
major urinary protein 10 |
|
chr4_-_60421933 Show fit | 6.17 |
ENSMUST00000107506.2
ENSMUST00000122381.1 ENSMUST00000118759.1 ENSMUST00000122177.1 |
major urinary protein 9 |
|
chr3_+_63295815 Show fit | 6.16 |
ENSMUST00000029400.1
|
membrane metallo endopeptidase |
|
chr3_+_138374121 Show fit | 6.08 |
ENSMUST00000171054.1
|
alcohol dehydrogenase 6 (class V), pseudogene 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.2 | 13.6 | GO:0071394 | cellular response to testosterone stimulus(GO:0071394) |
0.0 | 10.5 | GO:0043434 | response to peptide hormone(GO:0043434) |
0.4 | 7.2 | GO:0006120 | mitochondrial electron transport, NADH to ubiquinone(GO:0006120) |
1.4 | 7.0 | GO:0001970 | positive regulation of activation of membrane attack complex(GO:0001970) |
0.1 | 6.6 | GO:0042773 | ATP synthesis coupled electron transport(GO:0042773) |
0.5 | 6.5 | GO:0052696 | flavonoid glucuronidation(GO:0052696) xenobiotic glucuronidation(GO:0052697) |
2.1 | 6.2 | GO:0071492 | cellular response to UV-A(GO:0071492) |
0.2 | 5.8 | GO:0019373 | epoxygenase P450 pathway(GO:0019373) |
1.7 | 5.0 | GO:0009753 | response to jasmonic acid(GO:0009753) cellular response to jasmonic acid stimulus(GO:0071395) |
0.0 | 5.0 | GO:0007608 | sensory perception of smell(GO:0007608) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 22.8 | GO:0070469 | respiratory chain(GO:0070469) |
0.0 | 17.5 | GO:0005783 | endoplasmic reticulum(GO:0005783) |
0.0 | 13.0 | GO:0005743 | mitochondrial inner membrane(GO:0005743) |
0.0 | 10.9 | GO:0016323 | basolateral plasma membrane(GO:0016323) |
0.0 | 9.7 | GO:0008021 | synaptic vesicle(GO:0008021) |
0.0 | 9.4 | GO:0005777 | peroxisome(GO:0005777) microbody(GO:0042579) |
0.1 | 8.0 | GO:0072562 | blood microparticle(GO:0072562) |
0.6 | 7.0 | GO:0005579 | membrane attack complex(GO:0005579) |
0.1 | 4.0 | GO:0016235 | aggresome(GO:0016235) |
0.3 | 3.5 | GO:0031315 | extrinsic component of mitochondrial outer membrane(GO:0031315) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 26.7 | GO:0015020 | glucuronosyltransferase activity(GO:0015020) |
0.6 | 17.5 | GO:0008137 | NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136) |
0.1 | 9.5 | GO:0004867 | serine-type endopeptidase inhibitor activity(GO:0004867) |
0.1 | 8.5 | GO:0004222 | metalloendopeptidase activity(GO:0004222) |
2.6 | 7.7 | GO:0005186 | insulin-activated receptor activity(GO:0005009) pheromone activity(GO:0005186) |
0.2 | 5.8 | GO:0008392 | arachidonic acid epoxygenase activity(GO:0008392) |
0.1 | 5.2 | GO:0015347 | sodium-independent organic anion transmembrane transporter activity(GO:0015347) |
1.7 | 5.0 | GO:0047006 | 17-alpha,20-alpha-dihydroxypregn-4-en-3-one dehydrogenase activity(GO:0047006) |
0.0 | 4.6 | GO:0004984 | olfactory receptor activity(GO:0004984) |
0.1 | 4.1 | GO:0004129 | cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.1 | ST PHOSPHOINOSITIDE 3 KINASE PATHWAY | PI3K Pathway |
0.1 | 3.8 | PID HNF3A PATHWAY | FOXA1 transcription factor network |
0.1 | 3.5 | PID LIS1 PATHWAY | Lissencephaly gene (LIS1) in neuronal migration and development |
0.1 | 2.8 | PID ARF6 PATHWAY | Arf6 signaling events |
0.0 | 2.2 | PID RETINOIC ACID PATHWAY | Retinoic acid receptors-mediated signaling |
0.0 | 2.0 | PID TCR CALCIUM PATHWAY | Calcium signaling in the CD4+ TCR pathway |
0.0 | 1.9 | PID CASPASE PATHWAY | Caspase cascade in apoptosis |
0.1 | 1.8 | PID TOLL ENDOGENOUS PATHWAY | Endogenous TLR signaling |
0.0 | 1.8 | WNT SIGNALING | Genes related to Wnt-mediated signal transduction |
0.1 | 1.7 | PID S1P META PATHWAY | Sphingosine 1-phosphate (S1P) pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 7.0 | REACTOME COMPLEMENT CASCADE | Genes involved in Complement cascade |
0.2 | 5.2 | REACTOME SYNTHESIS OF BILE ACIDS AND BILE SALTS VIA 7ALPHA HYDROXYCHOLESTEROL | Genes involved in Synthesis of bile acids and bile salts via 7alpha-hydroxycholesterol |
0.2 | 5.1 | REACTOME SULFUR AMINO ACID METABOLISM | Genes involved in Sulfur amino acid metabolism |
0.0 | 4.5 | REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY | Genes involved in Nuclear Receptor transcription pathway |
0.3 | 4.4 | REACTOME GLUCURONIDATION | Genes involved in Glucuronidation |
0.1 | 3.9 | REACTOME CASPASE MEDIATED CLEAVAGE OF CYTOSKELETAL PROTEINS | Genes involved in Caspase-mediated cleavage of cytoskeletal proteins |
0.1 | 3.8 | REACTOME RESPIRATORY ELECTRON TRANSPORT | Genes involved in Respiratory electron transport |
0.0 | 3.4 | REACTOME PEPTIDE LIGAND BINDING RECEPTORS | Genes involved in Peptide ligand-binding receptors |
0.2 | 3.0 | REACTOME FORMATION OF ATP BY CHEMIOSMOTIC COUPLING | Genes involved in Formation of ATP by chemiosmotic coupling |
0.1 | 2.7 | REACTOME CHOLESTEROL BIOSYNTHESIS | Genes involved in Cholesterol biosynthesis |