avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Lhx3 | mm10_v2_chr2_-_26206535_26206580 | -0.57 | 3.1e-04 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr3_+_60081861 Show fit | 4.55 |
ENSMUST00000029326.5
|
succinate receptor 1 |
|
chr19_+_20601958 Show fit | 3.98 |
ENSMUST00000087638.3
|
aldehyde dehydrogenase family 1, subfamily A1 |
|
chr3_-_67515487 Show fit | 2.21 |
ENSMUST00000178314.1
ENSMUST00000054825.4 |
retinoic acid receptor responder (tazarotene induced) 1 |
|
chr18_-_38866702 Show fit | 2.17 |
ENSMUST00000115582.1
|
fibroblast growth factor 1 |
|
chr6_+_124304646 Show fit | 2.15 |
ENSMUST00000112541.2
ENSMUST00000032234.2 |
CD163 antigen |
|
chr19_-_39649046 Show fit | 1.93 |
ENSMUST00000067328.6
|
cytochrome P450, family 2, subfamily c, polypeptide 67 |
|
chrX_-_143933089 Show fit | 1.89 |
ENSMUST00000087313.3
|
doublecortin |
|
chrM_+_9452 Show fit | 1.82 |
ENSMUST00000082411.1
|
mitochondrially encoded NADH dehydrogenase 3 |
|
chr1_+_21240581 Show fit | 1.62 |
ENSMUST00000027067.8
|
glutathione S-transferase, alpha 3 |
|
chr1_+_21240597 Show fit | 1.58 |
ENSMUST00000121676.1
|
glutathione S-transferase, alpha 3 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 4.0 | GO:0042904 | 9-cis-retinoic acid biosynthetic process(GO:0042904) 9-cis-retinoic acid metabolic process(GO:0042905) |
0.1 | 3.9 | GO:0019373 | epoxygenase P450 pathway(GO:0019373) |
1.1 | 3.2 | GO:0046223 | mycotoxin catabolic process(GO:0043387) aflatoxin catabolic process(GO:0046223) organic heteropentacyclic compound catabolic process(GO:1901377) |
0.2 | 2.7 | GO:0048672 | positive regulation of collateral sprouting(GO:0048672) |
0.4 | 2.2 | GO:1901509 | regulation of endothelial tube morphogenesis(GO:1901509) |
0.2 | 2.2 | GO:0052697 | flavonoid glucuronidation(GO:0052696) xenobiotic glucuronidation(GO:0052697) |
0.0 | 2.1 | GO:0006953 | acute-phase response(GO:0006953) |
0.0 | 2.0 | GO:0071385 | cellular response to glucocorticoid stimulus(GO:0071385) |
0.0 | 1.5 | GO:0030903 | notochord development(GO:0030903) |
0.2 | 1.4 | GO:0030242 | pexophagy(GO:0030242) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.0 | GO:0030426 | growth cone(GO:0030426) |
0.1 | 2.9 | GO:0005747 | mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271) |
0.2 | 1.3 | GO:0031429 | box H/ACA snoRNP complex(GO:0031429) box H/ACA RNP complex(GO:0072588) |
0.1 | 1.2 | GO:0045275 | respiratory chain complex III(GO:0045275) |
0.1 | 1.2 | GO:0042612 | MHC class I protein complex(GO:0042612) |
0.0 | 1.0 | GO:0000930 | gamma-tubulin complex(GO:0000930) |
0.0 | 1.0 | GO:0070469 | respiratory chain(GO:0070469) |
0.0 | 0.8 | GO:0071564 | npBAF complex(GO:0071564) |
0.2 | 0.6 | GO:0097636 | intrinsic component of autophagosome membrane(GO:0097636) integral component of autophagosome membrane(GO:0097637) |
0.0 | 0.6 | GO:0031362 | anchored component of external side of plasma membrane(GO:0031362) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.3 | 4.0 | GO:0018479 | benzaldehyde dehydrogenase (NAD+) activity(GO:0018479) |
0.1 | 3.9 | GO:0050136 | NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136) |
0.1 | 3.9 | GO:0008392 | arachidonic acid epoxygenase activity(GO:0008392) |
0.1 | 3.2 | GO:0004364 | glutathione transferase activity(GO:0004364) |
0.1 | 2.2 | GO:0044548 | S100 protein binding(GO:0044548) |
0.1 | 2.2 | GO:0015020 | glucuronosyltransferase activity(GO:0015020) |
0.0 | 2.1 | GO:0005044 | scavenger receptor activity(GO:0005044) |
0.1 | 1.4 | GO:0001594 | trace-amine receptor activity(GO:0001594) |
0.0 | 1.4 | GO:0000062 | fatty-acyl-CoA binding(GO:0000062) |
0.3 | 1.3 | GO:0019770 | IgG receptor activity(GO:0019770) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 2.7 | PID LIS1 PATHWAY | Lissencephaly gene (LIS1) in neuronal migration and development |
0.0 | 1.8 | PID FGF PATHWAY | FGF signaling pathway |
0.1 | 1.4 | ST G ALPHA S PATHWAY | G alpha s Pathway |
0.0 | 1.1 | PID CDC42 REG PATHWAY | Regulation of CDC42 activity |
0.0 | 1.0 | PID AR TF PATHWAY | Regulation of Androgen receptor activity |
0.0 | 0.6 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.0 | 0.5 | PID ECADHERIN KERATINOCYTE PATHWAY | E-cadherin signaling in keratinocytes |
0.0 | 0.4 | PID HDAC CLASSIII PATHWAY | Signaling events mediated by HDAC Class III |
0.0 | 0.2 | PID S1P S1P2 PATHWAY | S1P2 pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 4.0 | REACTOME ETHANOL OXIDATION | Genes involved in Ethanol oxidation |
0.1 | 3.2 | REACTOME GLUTATHIONE CONJUGATION | Genes involved in Glutathione conjugation |
0.0 | 2.4 | REACTOME L1CAM INTERACTIONS | Genes involved in L1CAM interactions |
0.1 | 2.2 | REACTOME SIGNALING BY FGFR3 MUTANTS | Genes involved in Signaling by FGFR3 mutants |
0.1 | 1.4 | REACTOME REGULATION OF COMPLEMENT CASCADE | Genes involved in Regulation of Complement cascade |
0.1 | 0.9 | REACTOME THE ACTIVATION OF ARYLSULFATASES | Genes involved in The activation of arylsulfatases |
0.0 | 0.9 | REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS | Genes involved in Sphingolipid de novo biosynthesis |
0.0 | 0.8 | REACTOME ACYL CHAIN REMODELLING OF PI | Genes involved in Acyl chain remodelling of PI |
0.0 | 0.6 | REACTOME DARPP 32 EVENTS | Genes involved in DARPP-32 events |
0.0 | 0.5 | REACTOME APOPTOTIC CLEAVAGE OF CELL ADHESION PROTEINS | Genes involved in Apoptotic cleavage of cell adhesion proteins |