avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Lhx4 | mm10_v2_chr1_-_155742120_155742136 | 0.09 | 6.1e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr6_-_41446062 Show fit | 2.15 |
ENSMUST00000095999.5
|
predicted gene 10334 |
|
chr2_-_160619971 Show fit | 2.07 |
ENSMUST00000109473.1
|
predicted gene 14221 |
|
chr6_-_41377604 Show fit | 2.03 |
ENSMUST00000096003.5
|
protease, serine, 3 |
|
chr14_+_80000292 Show fit | 1.65 |
ENSMUST00000088735.3
|
olfactomedin 4 |
|
chr10_+_75566257 Show fit | 1.20 |
ENSMUST00000129232.1
ENSMUST00000143792.1 |
gamma-glutamyltransferase 1 |
|
chr14_+_27000362 Show fit | 1.12 |
ENSMUST00000035433.8
|
homeobox gene expressed in ES cells |
|
chr5_-_62765618 Show fit | 1.04 |
ENSMUST00000159470.1
|
ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 |
|
chr17_-_78684262 Show fit | 0.98 |
ENSMUST00000145480.1
|
striatin, calmodulin binding protein |
|
chr1_-_89933290 Show fit | 0.93 |
ENSMUST00000036954.7
|
gastrulation brain homeobox 2 |
|
chr15_+_98571004 Show fit | 0.80 |
ENSMUST00000023728.6
|
RIKEN cDNA 4930415O20 gene |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.0 | GO:0007586 | digestion(GO:0007586) |
0.0 | 1.7 | GO:1900026 | positive regulation of substrate adhesion-dependent cell spreading(GO:1900026) |
0.1 | 1.2 | GO:1901750 | leukotriene D4 metabolic process(GO:1901748) leukotriene D4 biosynthetic process(GO:1901750) |
0.1 | 1.1 | GO:0030916 | otic vesicle formation(GO:0030916) |
0.3 | 0.9 | GO:1905000 | regulation of membrane repolarization during atrial cardiac muscle cell action potential(GO:1905000) |
0.1 | 0.9 | GO:0021555 | midbrain-hindbrain boundary morphogenesis(GO:0021555) |
0.1 | 0.8 | GO:0033353 | S-adenosylmethionine cycle(GO:0033353) |
0.0 | 0.8 | GO:0050869 | negative regulation of B cell activation(GO:0050869) |
0.0 | 0.7 | GO:0048791 | calcium ion-regulated exocytosis of neurotransmitter(GO:0048791) |
0.1 | 0.6 | GO:0044268 | multicellular organismal protein metabolic process(GO:0044268) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.7 | GO:0042581 | specific granule(GO:0042581) |
0.0 | 1.0 | GO:0000159 | protein phosphatase type 2A complex(GO:0000159) |
0.2 | 0.9 | GO:0031523 | Myb complex(GO:0031523) |
0.0 | 0.6 | GO:0002080 | acrosomal membrane(GO:0002080) |
0.0 | 0.5 | GO:0032045 | guanyl-nucleotide exchange factor complex(GO:0032045) |
0.0 | 0.5 | GO:0036056 | filtration diaphragm(GO:0036056) slit diaphragm(GO:0036057) |
0.0 | 0.5 | GO:0097440 | apical dendrite(GO:0097440) |
0.0 | 0.4 | GO:0001891 | phagocytic cup(GO:0001891) |
0.1 | 0.3 | GO:0060187 | cell pole(GO:0060187) |
0.0 | 0.3 | GO:0044530 | supraspliceosomal complex(GO:0044530) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.1 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.0 | 2.1 | GO:0001190 | transcriptional activator activity, RNA polymerase II transcription factor binding(GO:0001190) transcriptional repressor activity, RNA polymerase II activating transcription factor binding(GO:0098811) |
0.1 | 1.2 | GO:0036374 | glutathione hydrolase activity(GO:0036374) |
0.0 | 1.1 | GO:0048027 | mRNA 5'-UTR binding(GO:0048027) |
0.0 | 1.0 | GO:0070016 | armadillo repeat domain binding(GO:0070016) |
0.2 | 0.9 | GO:0034988 | Fc-gamma receptor I complex binding(GO:0034988) |
0.0 | 0.9 | GO:0030276 | clathrin binding(GO:0030276) |
0.1 | 0.8 | GO:0004013 | adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802) |
0.0 | 0.8 | GO:0001965 | G-protein alpha-subunit binding(GO:0001965) |
0.0 | 0.8 | GO:0005547 | phosphatidylinositol-3,4,5-trisphosphate binding(GO:0005547) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.9 | PID ARF6 PATHWAY | Arf6 signaling events |
0.0 | 0.9 | PID WNT NONCANONICAL PATHWAY | Noncanonical Wnt signaling pathway |
0.0 | 0.7 | PID ER NONGENOMIC PATHWAY | Plasma membrane estrogen receptor signaling |
0.0 | 0.6 | PID P38 MK2 PATHWAY | p38 signaling mediated by MAPKAP kinases |
0.0 | 0.5 | PID IL8 CXCR2 PATHWAY | IL8- and CXCR2-mediated signaling events |
0.0 | 0.5 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.0 | 0.2 | PID SYNDECAN 3 PATHWAY | Syndecan-3-mediated signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.2 | REACTOME GLUTATHIONE CONJUGATION | Genes involved in Glutathione conjugation |
0.0 | 0.6 | REACTOME METABOLISM OF PORPHYRINS | Genes involved in Metabolism of porphyrins |
0.0 | 0.6 | REACTOME FATTY ACYL COA BIOSYNTHESIS | Genes involved in Fatty Acyl-CoA Biosynthesis |
0.1 | 0.5 | REACTOME HORMONE LIGAND BINDING RECEPTORS | Genes involved in Hormone ligand-binding receptors |
0.0 | 0.5 | REACTOME THE ROLE OF NEF IN HIV1 REPLICATION AND DISEASE PATHOGENESIS | Genes involved in The role of Nef in HIV-1 replication and disease pathogenesis |
0.0 | 0.5 | REACTOME SIGNAL TRANSDUCTION BY L1 | Genes involved in Signal transduction by L1 |
0.0 | 0.4 | REACTOME TIE2 SIGNALING | Genes involved in Tie2 Signaling |
0.0 | 0.4 | REACTOME PHOSPHORYLATION OF CD3 AND TCR ZETA CHAINS | Genes involved in Phosphorylation of CD3 and TCR zeta chains |
0.0 | 0.4 | REACTOME ABCA TRANSPORTERS IN LIPID HOMEOSTASIS | Genes involved in ABCA transporters in lipid homeostasis |
0.0 | 0.3 | REACTOME HYALURONAN METABOLISM | Genes involved in Hyaluronan metabolism |