avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Lmx1b | mm10_v2_chr2_-_33640480_33640511 | 0.40 | 1.5e-02 | Click! |
Lhx1 | mm10_v2_chr11_-_84525514_84525542 | 0.31 | 7.0e-02 | Click! |
Lhx5 | mm10_v2_chr5_+_120431770_120431905 | 0.11 | 5.4e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr6_-_41377604 Show fit | 10.05 |
ENSMUST00000096003.5
|
protease, serine, 3 |
|
chr6_-_41446062 Show fit | 8.44 |
ENSMUST00000095999.5
|
predicted gene 10334 |
|
chr17_-_48432723 Show fit | 4.20 |
ENSMUST00000046549.3
|
apolipoprotein B mRNA editing enzyme, catalytic polypeptide 2 |
|
chr14_+_80000292 Show fit | 3.71 |
ENSMUST00000088735.3
|
olfactomedin 4 |
|
chr2_-_160619971 Show fit | 3.50 |
ENSMUST00000109473.1
|
predicted gene 14221 |
|
chr6_+_41354105 Show fit | 3.16 |
ENSMUST00000072103.5
|
trypsin 10 |
|
chr7_-_142656018 Show fit | 3.08 |
ENSMUST00000178921.1
|
insulin-like growth factor 2 |
|
chr4_+_145585166 Show fit | 3.04 |
ENSMUST00000105739.1
ENSMUST00000119718.1 |
predicted gene 13212 |
|
chr7_-_142699510 Show fit | 3.03 |
ENSMUST00000105934.1
|
insulin II |
|
chr10_+_75566257 Show fit | 2.81 |
ENSMUST00000129232.1
ENSMUST00000143792.1 |
gamma-glutamyltransferase 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 22.6 | GO:0007586 | digestion(GO:0007586) |
0.4 | 4.0 | GO:0016554 | cytidine to uridine editing(GO:0016554) |
0.1 | 3.7 | GO:1900026 | positive regulation of substrate adhesion-dependent cell spreading(GO:1900026) |
0.4 | 3.1 | GO:0038028 | insulin receptor signaling pathway via phosphatidylinositol 3-kinase(GO:0038028) |
1.0 | 3.0 | GO:0033861 | negative regulation of NAD(P)H oxidase activity(GO:0033861) neuron projection maintenance(GO:1990535) |
0.1 | 2.9 | GO:0010880 | regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum(GO:0010880) |
0.4 | 2.8 | GO:1901748 | leukotriene D4 metabolic process(GO:1901748) leukotriene D4 biosynthetic process(GO:1901750) |
0.5 | 2.4 | GO:0038094 | Fc-gamma receptor signaling pathway(GO:0038094) |
0.0 | 1.9 | GO:0045761 | regulation of adenylate cyclase activity(GO:0045761) |
0.6 | 1.7 | GO:0002149 | hypochlorous acid metabolic process(GO:0002148) hypochlorous acid biosynthetic process(GO:0002149) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 31.1 | GO:0005615 | extracellular space(GO:0005615) |
0.2 | 3.7 | GO:0042581 | specific granule(GO:0042581) |
0.1 | 3.5 | GO:0005732 | small nucleolar ribonucleoprotein complex(GO:0005732) |
0.1 | 2.6 | GO:0033017 | sarcoplasmic reticulum membrane(GO:0033017) |
0.2 | 1.7 | GO:0005766 | primary lysosome(GO:0005766) azurophil granule(GO:0042582) |
0.0 | 1.5 | GO:0030864 | cortical actin cytoskeleton(GO:0030864) |
0.0 | 1.2 | GO:0032982 | muscle myosin complex(GO:0005859) myosin filament(GO:0032982) |
0.1 | 1.0 | GO:0043205 | microfibril(GO:0001527) fibril(GO:0043205) |
0.3 | 0.9 | GO:0033193 | Lsd1/2 complex(GO:0033193) |
0.1 | 0.9 | GO:0005927 | muscle tendon junction(GO:0005927) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 21.1 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.2 | 6.1 | GO:0005159 | insulin-like growth factor receptor binding(GO:0005159) |
0.7 | 4.2 | GO:0004126 | cytidine deaminase activity(GO:0004126) |
0.1 | 3.0 | GO:0034987 | immunoglobulin receptor binding(GO:0034987) |
0.2 | 2.8 | GO:0036374 | glutathione hydrolase activity(GO:0036374) |
0.1 | 2.7 | GO:0004181 | metallocarboxypeptidase activity(GO:0004181) |
0.0 | 2.2 | GO:0005179 | hormone activity(GO:0005179) |
0.1 | 1.9 | GO:0008179 | adenylate cyclase binding(GO:0008179) |
0.0 | 1.5 | GO:0005158 | insulin receptor binding(GO:0005158) |
0.1 | 1.4 | GO:0030275 | LRR domain binding(GO:0030275) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 9.6 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.0 | 3.1 | PID AJDISS 2PATHWAY | Posttranslational regulation of adherens junction stability and dissassembly |
0.0 | 3.1 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.0 | 1.7 | PID IL23 PATHWAY | IL23-mediated signaling events |
0.0 | 1.5 | PID RET PATHWAY | Signaling events regulated by Ret tyrosine kinase |
0.0 | 1.4 | PID REG GR PATHWAY | Glucocorticoid receptor regulatory network |
0.0 | 1.3 | PID NOTCH PATHWAY | Notch signaling pathway |
0.0 | 1.0 | PID ATR PATHWAY | ATR signaling pathway |
0.0 | 0.8 | SA REG CASCADE OF CYCLIN EXPR | Expression of cyclins regulates progression through the cell cycle by activating cyclin-dependent kinases. |
0.0 | 0.8 | PID ARF6 TRAFFICKING PATHWAY | Arf6 trafficking events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.1 | REACTOME REGULATION OF INSULIN LIKE GROWTH FACTOR IGF ACTIVITY BY INSULIN LIKE GROWTH FACTOR BINDING PROTEINS IGFBPS | Genes involved in Regulation of Insulin-like Growth Factor (IGF) Activity by Insulin-like Growth Factor Binding Proteins (IGFBPs) |
0.1 | 2.8 | REACTOME GLUTATHIONE CONJUGATION | Genes involved in Glutathione conjugation |
0.1 | 2.3 | REACTOME METABOLISM OF STEROID HORMONES AND VITAMINS A AND D | Genes involved in Metabolism of steroid hormones and vitamins A and D |
0.0 | 1.9 | REACTOME SIGNALING BY ROBO RECEPTOR | Genes involved in Signaling by Robo receptor |
0.0 | 1.6 | REACTOME INTERFERON GAMMA SIGNALING | Genes involved in Interferon gamma signaling |
0.1 | 1.5 | REACTOME SIGNAL ATTENUATION | Genes involved in Signal attenuation |
0.2 | 1.3 | REACTOME HORMONE LIGAND BINDING RECEPTORS | Genes involved in Hormone ligand-binding receptors |
0.0 | 1.1 | REACTOME MEIOTIC SYNAPSIS | Genes involved in Meiotic Synapsis |
0.0 | 0.9 | REACTOME AMINE DERIVED HORMONES | Genes involved in Amine-derived hormones |
0.1 | 0.8 | REACTOME CDC6 ASSOCIATION WITH THE ORC ORIGIN COMPLEX | Genes involved in CDC6 association with the ORC:origin complex |