avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Mafb | mm10_v2_chr2_-_160367057_160367073 | 0.29 | 9.0e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr11_+_67277124 Show fit | 9.76 |
ENSMUST00000019625.5
|
myosin, heavy polypeptide 8, skeletal muscle, perinatal |
|
chr16_-_36367623 Show fit | 8.50 |
ENSMUST00000096089.2
|
cDNA sequence BC100530 |
|
chr3_-_92588982 Show fit | 8.23 |
ENSMUST00000098888.5
|
sperm mitochondria-associated cysteine-rich protein |
|
chr16_-_36455378 Show fit | 8.05 |
ENSMUST00000068182.2
|
stefin A3 |
|
chr12_-_114060315 Show fit | 7.88 |
ENSMUST00000103469.2
|
immunoglobulin heavy variable V14-3 |
|
chr16_+_36156801 Show fit | 7.55 |
ENSMUST00000079184.4
|
stefin A2 like 1 |
|
chr6_+_41392356 Show fit | 7.00 |
ENSMUST00000049079.7
|
predicted gene 5771 |
|
chr16_+_36210403 Show fit | 6.38 |
ENSMUST00000089628.3
|
predicted gene 5416 |
|
chr10_+_79886302 Show fit | 5.94 |
ENSMUST00000046091.5
|
elastase, neutrophil expressed |
|
chr10_+_75573448 Show fit | 5.83 |
ENSMUST00000006508.3
|
gamma-glutamyltransferase 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 17.7 | GO:0006910 | phagocytosis, recognition(GO:0006910) |
0.1 | 11.6 | GO:0007586 | digestion(GO:0007586) |
0.6 | 9.8 | GO:0030049 | muscle filament sliding(GO:0030049) |
1.2 | 8.1 | GO:0007341 | penetration of zona pellucida(GO:0007341) |
2.1 | 6.4 | GO:0045079 | negative regulation of chemokine biosynthetic process(GO:0045079) |
0.7 | 5.8 | GO:1901750 | leukotriene D4 metabolic process(GO:1901748) leukotriene D4 biosynthetic process(GO:1901750) |
0.1 | 5.1 | GO:0060236 | regulation of mitotic spindle organization(GO:0060236) |
1.7 | 5.0 | GO:0015811 | L-cystine transport(GO:0015811) |
0.1 | 4.9 | GO:0051693 | actin filament capping(GO:0051693) |
0.1 | 4.7 | GO:1900026 | positive regulation of substrate adhesion-dependent cell spreading(GO:1900026) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.0 | 17.7 | GO:0042571 | immunoglobulin complex, circulating(GO:0042571) |
0.4 | 9.8 | GO:0032982 | myosin filament(GO:0032982) |
1.1 | 9.2 | GO:0005818 | aster(GO:0005818) |
0.1 | 8.9 | GO:0017053 | transcriptional repressor complex(GO:0017053) |
0.0 | 6.1 | GO:0005578 | proteinaceous extracellular matrix(GO:0005578) |
0.0 | 5.9 | GO:0005741 | mitochondrial outer membrane(GO:0005741) |
0.0 | 5.2 | GO:0016605 | PML body(GO:0016605) |
0.0 | 5.0 | GO:0031526 | brush border membrane(GO:0031526) |
0.7 | 4.4 | GO:0032437 | cuticular plate(GO:0032437) |
0.2 | 4.0 | GO:0042581 | specific granule(GO:0042581) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 17.7 | GO:0034987 | immunoglobulin receptor binding(GO:0034987) |
0.1 | 13.4 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.0 | 7.0 | GO:0003779 | actin binding(GO:0003779) |
0.0 | 6.8 | GO:0001078 | transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001078) |
0.1 | 6.4 | GO:0003777 | microtubule motor activity(GO:0003777) |
0.1 | 5.9 | GO:0001106 | RNA polymerase II transcription corepressor activity(GO:0001106) |
0.5 | 5.8 | GO:0036374 | glutathione hydrolase activity(GO:0036374) |
0.2 | 5.8 | GO:0001968 | fibronectin binding(GO:0001968) |
0.2 | 5.6 | GO:0000146 | microfilament motor activity(GO:0000146) |
0.6 | 5.1 | GO:0061676 | importin-alpha family protein binding(GO:0061676) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 12.1 | PID UPA UPAR PATHWAY | Urokinase-type plasminogen activator (uPA) and uPAR-mediated signaling |
0.1 | 7.9 | PID PLK1 PATHWAY | PLK1 signaling events |
0.1 | 4.8 | PID P38 MK2 PATHWAY | p38 signaling mediated by MAPKAP kinases |
0.2 | 3.4 | PID THROMBIN PAR4 PATHWAY | PAR4-mediated thrombin signaling events |
0.0 | 3.0 | PID PI3KCI PATHWAY | Class I PI3K signaling events |
0.0 | 3.0 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.0 | 2.8 | PID P73PATHWAY | p73 transcription factor network |
0.0 | 2.5 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.0 | 2.2 | PID MYC REPRESS PATHWAY | Validated targets of C-MYC transcriptional repression |
0.0 | 2.2 | PID HIF1 TFPATHWAY | HIF-1-alpha transcription factor network |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 14.8 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.5 | 14.2 | REACTOME DEGRADATION OF THE EXTRACELLULAR MATRIX | Genes involved in Degradation of the extracellular matrix |
0.1 | 6.1 | REACTOME ADP SIGNALLING THROUGH P2RY1 | Genes involved in ADP signalling through P2Y purinoceptor 1 |
0.1 | 5.0 | REACTOME BASIGIN INTERACTIONS | Genes involved in Basigin interactions |
0.1 | 4.4 | REACTOME INTERACTION BETWEEN L1 AND ANKYRINS | Genes involved in Interaction between L1 and Ankyrins |
0.0 | 4.4 | REACTOME MITOTIC PROMETAPHASE | Genes involved in Mitotic Prometaphase |
0.3 | 3.7 | REACTOME REGULATION OF PYRUVATE DEHYDROGENASE PDH COMPLEX | Genes involved in Regulation of pyruvate dehydrogenase (PDH) complex |
0.2 | 3.6 | REACTOME NUCLEOTIDE LIKE PURINERGIC RECEPTORS | Genes involved in Nucleotide-like (purinergic) receptors |
0.1 | 2.5 | REACTOME HYALURONAN METABOLISM | Genes involved in Hyaluronan metabolism |
0.1 | 2.5 | REACTOME CHONDROITIN SULFATE BIOSYNTHESIS | Genes involved in Chondroitin sulfate biosynthesis |