avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Mef2c | mm10_v2_chr13_+_83573577_83573607 | 0.41 | 1.4e-02 | Click! |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 19.5 | GO:0003009 | skeletal muscle contraction(GO:0003009) |
0.2 | 14.3 | GO:0030239 | myofibril assembly(GO:0030239) |
1.6 | 9.4 | GO:0030241 | skeletal muscle myosin thick filament assembly(GO:0030241) |
1.1 | 7.7 | GO:0098735 | positive regulation of the force of heart contraction(GO:0098735) |
0.7 | 7.1 | GO:0071688 | striated muscle myosin thick filament assembly(GO:0071688) |
0.2 | 6.8 | GO:0070296 | sarcoplasmic reticulum calcium ion transport(GO:0070296) |
0.5 | 5.4 | GO:0048739 | cardiac muscle fiber development(GO:0048739) |
0.1 | 4.9 | GO:0032233 | positive regulation of actin filament bundle assembly(GO:0032233) |
0.0 | 4.7 | GO:0060048 | cardiac muscle contraction(GO:0060048) |
0.5 | 4.6 | GO:0043353 | enucleate erythrocyte differentiation(GO:0043353) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 32.3 | GO:0031674 | I band(GO:0031674) |
1.1 | 20.6 | GO:0005861 | troponin complex(GO:0005861) |
0.4 | 10.4 | GO:0005859 | muscle myosin complex(GO:0005859) |
2.7 | 8.0 | GO:0033018 | sarcoplasmic reticulum lumen(GO:0033018) |
0.8 | 7.3 | GO:0097512 | cardiac myofibril(GO:0097512) |
0.1 | 7.1 | GO:0030016 | myofibril(GO:0030016) |
0.1 | 6.0 | GO:0016528 | sarcoplasm(GO:0016528) |
0.3 | 5.8 | GO:0033017 | sarcoplasmic reticulum membrane(GO:0033017) |
0.2 | 3.3 | GO:0016461 | unconventional myosin complex(GO:0016461) |
0.4 | 3.2 | GO:0016012 | sarcoglycan complex(GO:0016012) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 15.7 | GO:0051371 | muscle alpha-actinin binding(GO:0051371) |
0.0 | 14.5 | GO:0005509 | calcium ion binding(GO:0005509) |
2.6 | 13.0 | GO:0051373 | FATZ binding(GO:0051373) |
0.3 | 11.8 | GO:0003785 | actin monomer binding(GO:0003785) |
1.1 | 10.9 | GO:0031014 | troponin T binding(GO:0031014) |
0.0 | 8.8 | GO:0003779 | actin binding(GO:0003779) |
1.3 | 7.8 | GO:0030899 | calcium-dependent ATPase activity(GO:0030899) |
0.0 | 7.1 | GO:0004842 | ubiquitin-protein transferase activity(GO:0004842) |
0.0 | 4.3 | GO:0048306 | calcium-dependent protein binding(GO:0048306) |
0.4 | 3.7 | GO:0003876 | AMP deaminase activity(GO:0003876) adenosine-phosphate deaminase activity(GO:0047623) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 7.7 | PID THROMBIN PAR4 PATHWAY | PAR4-mediated thrombin signaling events |
0.0 | 0.9 | PID ARF6 PATHWAY | Arf6 signaling events |
0.0 | 0.8 | PID MAPK TRK PATHWAY | Trk receptor signaling mediated by the MAPK pathway |
0.0 | 0.7 | ST ADRENERGIC | Adrenergic Pathway |
0.0 | 0.7 | PID PI3KCI PATHWAY | Class I PI3K signaling events |
0.0 | 0.6 | PID HDAC CLASSIII PATHWAY | Signaling events mediated by HDAC Class III |
0.0 | 0.6 | SIG PIP3 SIGNALING IN B LYMPHOCYTES | Genes related to PIP3 signaling in B lymphocytes |
0.0 | 0.5 | PID INTEGRIN A4B1 PATHWAY | Alpha4 beta1 integrin signaling events |
0.0 | 0.4 | SA CASPASE CASCADE | Apoptosis is mediated by caspases, cysteine proteases arranged in a proteolytic cascade. |
0.0 | 0.2 | PID VEGF VEGFR PATHWAY | VEGF and VEGFR signaling network |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.8 | 43.9 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.2 | 3.7 | REACTOME PURINE SALVAGE | Genes involved in Purine salvage |
0.0 | 3.4 | REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION | Genes involved in Antigen processing: Ubiquitination & Proteasome degradation |
0.2 | 2.7 | REACTOME DEFENSINS | Genes involved in Defensins |
0.1 | 1.6 | REACTOME GLYCOGEN BREAKDOWN GLYCOGENOLYSIS | Genes involved in Glycogen breakdown (glycogenolysis) |
0.1 | 1.5 | REACTOME SYNTHESIS AND INTERCONVERSION OF NUCLEOTIDE DI AND TRIPHOSPHATES | Genes involved in Synthesis and interconversion of nucleotide di- and triphosphates |
0.0 | 1.5 | REACTOME ERK MAPK TARGETS | Genes involved in ERK/MAPK targets |
0.0 | 1.5 | REACTOME GLYCOLYSIS | Genes involved in Glycolysis |
0.0 | 1.3 | REACTOME ABC FAMILY PROTEINS MEDIATED TRANSPORT | Genes involved in ABC-family proteins mediated transport |
0.0 | 1.0 | REACTOME CIRCADIAN REPRESSION OF EXPRESSION BY REV ERBA | Genes involved in Circadian Repression of Expression by REV-ERBA |