avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Mga | mm10_v2_chr2_+_119897212_119897305 | 0.57 | 2.5e-04 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr14_-_56102458 Show fit | 11.90 |
ENSMUST00000015583.1
|
cathepsin G |
|
chr16_-_36408349 Show fit | 10.81 |
ENSMUST00000023619.6
|
stefin A2 |
|
chr11_+_116531744 Show fit | 5.82 |
ENSMUST00000106387.2
ENSMUST00000100201.3 |
sphingosine kinase 1 |
|
chr2_+_85136355 Show fit | 5.44 |
ENSMUST00000057019.7
|
apelin receptor |
|
chr11_+_116532441 Show fit | 5.08 |
ENSMUST00000106386.1
ENSMUST00000145737.1 ENSMUST00000155102.1 ENSMUST00000063446.6 |
sphingosine kinase 1 |
|
chr16_+_32186192 Show fit | 4.92 |
ENSMUST00000099990.3
|
brain expressed gene 6 |
|
chr14_+_65805832 Show fit | 4.55 |
ENSMUST00000022612.3
|
PDZ binding kinase |
|
chr19_+_47228804 Show fit | 4.16 |
ENSMUST00000111807.3
|
neuralized homolog 1A (Drosophila) |
|
chr11_+_116531097 Show fit | 3.75 |
ENSMUST00000138840.1
|
sphingosine kinase 1 |
|
chr15_-_66801577 Show fit | 3.72 |
ENSMUST00000168589.1
|
src-like adaptor |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.4 | 14.7 | GO:0019371 | cyclooxygenase pathway(GO:0019371) |
1.3 | 11.9 | GO:0070944 | neutrophil mediated killing of bacterium(GO:0070944) |
0.1 | 10.8 | GO:0010951 | negative regulation of endopeptidase activity(GO:0010951) |
1.4 | 5.4 | GO:0002030 | inhibitory G-protein coupled receptor phosphorylation(GO:0002030) |
1.0 | 5.2 | GO:0051142 | regulation of NK T cell proliferation(GO:0051140) positive regulation of NK T cell proliferation(GO:0051142) |
0.5 | 5.2 | GO:0002553 | histamine production involved in inflammatory response(GO:0002349) histamine secretion involved in inflammatory response(GO:0002441) histamine secretion by mast cell(GO:0002553) |
0.1 | 4.6 | GO:0070303 | negative regulation of stress-activated MAPK cascade(GO:0032873) negative regulation of stress-activated protein kinase signaling cascade(GO:0070303) |
0.4 | 4.2 | GO:0048170 | positive regulation of long-term neuronal synaptic plasticity(GO:0048170) |
0.0 | 3.7 | GO:0038083 | peptidyl-tyrosine autophosphorylation(GO:0038083) |
0.5 | 3.4 | GO:0033567 | DNA replication, Okazaki fragment processing(GO:0033567) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 11.9 | GO:0010494 | cytoplasmic stress granule(GO:0010494) |
0.0 | 11.6 | GO:0008021 | synaptic vesicle(GO:0008021) |
0.4 | 6.8 | GO:0031235 | intrinsic component of the cytoplasmic side of the plasma membrane(GO:0031235) |
0.1 | 4.2 | GO:0097440 | apical dendrite(GO:0097440) |
0.5 | 3.7 | GO:0031466 | Cul5-RING ubiquitin ligase complex(GO:0031466) |
0.2 | 3.0 | GO:0005652 | nuclear lamina(GO:0005652) |
0.0 | 2.2 | GO:0031234 | extrinsic component of cytoplasmic side of plasma membrane(GO:0031234) |
0.0 | 1.7 | GO:0034704 | calcium channel complex(GO:0034704) |
0.2 | 1.5 | GO:0002081 | outer acrosomal membrane(GO:0002081) |
0.0 | 1.5 | GO:0000118 | histone deacetylase complex(GO:0000118) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.1 | 14.7 | GO:0017050 | sphinganine kinase activity(GO:0008481) D-erythro-sphingosine kinase activity(GO:0017050) |
0.1 | 11.9 | GO:0008201 | heparin binding(GO:0008201) |
0.1 | 10.8 | GO:0004869 | cysteine-type endopeptidase inhibitor activity(GO:0004869) |
0.0 | 6.6 | GO:0005096 | GTPase activator activity(GO:0005096) |
0.5 | 5.2 | GO:0001609 | G-protein coupled adenosine receptor activity(GO:0001609) |
0.1 | 4.2 | GO:0045182 | translation regulator activity(GO:0045182) |
0.1 | 3.7 | GO:0005070 | SH3/SH2 adaptor activity(GO:0005070) |
0.4 | 3.4 | GO:0003910 | DNA ligase activity(GO:0003909) DNA ligase (ATP) activity(GO:0003910) |
1.0 | 3.1 | GO:0017084 | glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350) delta1-pyrroline-5-carboxylate synthetase activity(GO:0017084) amino acid kinase activity(GO:0019202) |
0.2 | 2.9 | GO:0002162 | dystroglycan binding(GO:0002162) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 14.7 | PID S1P META PATHWAY | Sphingosine 1-phosphate (S1P) pathway |
0.2 | 11.9 | PID UPA UPAR PATHWAY | Urokinase-type plasminogen activator (uPA) and uPAR-mediated signaling |
0.1 | 4.5 | PID CDC42 REG PATHWAY | Regulation of CDC42 activity |
0.1 | 3.9 | PID IL27 PATHWAY | IL27-mediated signaling events |
0.0 | 3.7 | PID PDGFRB PATHWAY | PDGFR-beta signaling pathway |
0.0 | 1.7 | ST FAS SIGNALING PATHWAY | Fas Signaling Pathway |
0.0 | 1.6 | SIG BCR SIGNALING PATHWAY | Members of the BCR signaling pathway |
0.0 | 1.4 | PID PTP1B PATHWAY | Signaling events mediated by PTP1B |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 14.7 | REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS | Genes involved in Sphingolipid de novo biosynthesis |
0.6 | 11.9 | REACTOME REGULATION OF INSULIN LIKE GROWTH FACTOR IGF ACTIVITY BY INSULIN LIKE GROWTH FACTOR BINDING PROTEINS IGFBPS | Genes involved in Regulation of Insulin-like Growth Factor (IGF) Activity by Insulin-like Growth Factor Binding Proteins (IGFBPs) |
0.0 | 5.4 | REACTOME PEPTIDE LIGAND BINDING RECEPTORS | Genes involved in Peptide ligand-binding receptors |
0.3 | 5.2 | REACTOME NUCLEOTIDE LIKE PURINERGIC RECEPTORS | Genes involved in Nucleotide-like (purinergic) receptors |
0.2 | 3.4 | REACTOME PROCESSIVE SYNTHESIS ON THE LAGGING STRAND | Genes involved in Processive synthesis on the lagging strand |
0.1 | 3.3 | REACTOME INTERFERON GAMMA SIGNALING | Genes involved in Interferon gamma signaling |
0.1 | 3.1 | REACTOME AMINO ACID SYNTHESIS AND INTERCONVERSION TRANSAMINATION | Genes involved in Amino acid synthesis and interconversion (transamination) |
0.0 | 1.4 | REACTOME FORMATION OF THE TERNARY COMPLEX AND SUBSEQUENTLY THE 43S COMPLEX | Genes involved in Formation of the ternary complex, and subsequently, the 43S complex |
0.1 | 0.9 | REACTOME PYRIMIDINE CATABOLISM | Genes involved in Pyrimidine catabolism |
0.0 | 0.8 | REACTOME OTHER SEMAPHORIN INTERACTIONS | Genes involved in Other semaphorin interactions |