avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Mnt | mm10_v2_chr11_+_74830920_74831005 | 0.16 | 3.6e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr15_+_80671829 Show fit | 2.42 |
ENSMUST00000023044.5
|
family with sequence similarity 83, member F |
|
chr16_+_32608973 Show fit | 1.84 |
ENSMUST00000120680.1
|
transferrin receptor |
|
chrX_-_136068236 Show fit | 1.69 |
ENSMUST00000049130.7
|
brain expressed X-linked 2 |
|
chrX_-_136215443 Show fit | 1.52 |
ENSMUST00000113120.1
ENSMUST00000113118.1 ENSMUST00000058125.8 |
brain expressed gene 1 |
|
chrX_+_136138996 Show fit | 1.50 |
ENSMUST00000116527.1
|
brain expressed gene 4 |
|
chr17_-_56476462 Show fit | 1.49 |
ENSMUST00000067538.5
|
protein tyrosine phosphatase, receptor type, S |
|
chrX_+_153139941 Show fit | 1.47 |
ENSMUST00000039720.4
ENSMUST00000144175.2 |
Ras-related GTP binding B |
|
chr1_+_172481788 Show fit | 1.44 |
ENSMUST00000127052.1
|
immunoglobulin superfamily, member 9 |
|
chr5_-_76951560 Show fit | 1.42 |
ENSMUST00000140076.1
|
phosphoribosyl pyrophosphate amidotransferase |
|
chr11_+_69095217 Show fit | 1.38 |
ENSMUST00000101004.2
|
period circadian clock 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 2.2 | GO:0070494 | regulation of thrombin receptor signaling pathway(GO:0070494) negative regulation of thrombin receptor signaling pathway(GO:0070495) |
0.2 | 2.2 | GO:0033572 | transferrin transport(GO:0033572) |
0.1 | 1.9 | GO:0097186 | amelogenesis(GO:0097186) |
0.1 | 1.8 | GO:0036295 | cellular response to increased oxygen levels(GO:0036295) |
0.3 | 1.7 | GO:0097167 | circadian regulation of translation(GO:0097167) |
0.3 | 1.7 | GO:0051581 | negative regulation of neurotransmitter uptake(GO:0051581) negative regulation of serotonin uptake(GO:0051612) |
0.0 | 1.7 | GO:0010738 | regulation of protein kinase A signaling(GO:0010738) |
0.0 | 1.7 | GO:0006270 | DNA replication initiation(GO:0006270) |
0.2 | 1.6 | GO:0009644 | response to high light intensity(GO:0009644) |
0.2 | 1.6 | GO:0070574 | cadmium ion transport(GO:0015691) cadmium ion transmembrane transport(GO:0070574) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 2.7 | GO:0060077 | inhibitory synapse(GO:0060077) |
0.1 | 2.0 | GO:0090544 | BAF-type complex(GO:0090544) |
0.2 | 1.8 | GO:1990712 | HFE-transferrin receptor complex(GO:1990712) |
0.0 | 1.8 | GO:0031519 | PcG protein complex(GO:0031519) |
0.0 | 1.8 | GO:0009925 | basal plasma membrane(GO:0009925) |
0.0 | 1.8 | GO:0017053 | transcriptional repressor complex(GO:0017053) |
0.3 | 1.6 | GO:1990131 | Gtr1-Gtr2 GTPase complex(GO:1990131) |
0.1 | 1.5 | GO:0033180 | proton-transporting V-type ATPase, V1 domain(GO:0033180) |
0.1 | 1.4 | GO:0005697 | telomerase holoenzyme complex(GO:0005697) |
0.0 | 1.4 | GO:0001725 | stress fiber(GO:0001725) contractile actin filament bundle(GO:0097517) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.9 | GO:0001102 | RNA polymerase II activating transcription factor binding(GO:0001102) |
0.1 | 2.8 | GO:0098632 | protein binding involved in cell-cell adhesion(GO:0098632) |
0.1 | 2.5 | GO:0070064 | proline-rich region binding(GO:0070064) |
0.0 | 2.1 | GO:0051018 | protein kinase A binding(GO:0051018) |
0.3 | 1.9 | GO:0008273 | calcium, potassium:sodium antiporter activity(GO:0008273) |
0.1 | 1.9 | GO:0034236 | protein kinase A catalytic subunit binding(GO:0034236) |
0.6 | 1.8 | GO:0004998 | transferrin receptor activity(GO:0004998) |
0.5 | 1.8 | GO:0005008 | hepatocyte growth factor-activated receptor activity(GO:0005008) |
0.0 | 1.8 | GO:0070888 | E-box binding(GO:0070888) |
0.0 | 1.7 | GO:0003725 | double-stranded RNA binding(GO:0003725) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.8 | PID HIF1 TFPATHWAY | HIF-1-alpha transcription factor network |
0.1 | 2.0 | PID CIRCADIAN PATHWAY | Circadian rhythm pathway |
0.0 | 1.9 | PID ARF6 PATHWAY | Arf6 signaling events |
0.0 | 1.9 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.1 | 1.4 | PID P38 GAMMA DELTA PATHWAY | Signaling mediated by p38-gamma and p38-delta |
0.0 | 1.4 | ST DIFFERENTIATION PATHWAY IN PC12 CELLS | Differentiation Pathway in PC12 Cells; this is a specific case of PAC1 Receptor Pathway. |
0.0 | 1.4 | PID E2F PATHWAY | E2F transcription factor network |
0.0 | 1.4 | PID P75 NTR PATHWAY | p75(NTR)-mediated signaling |
0.0 | 1.0 | PID AMB2 NEUTROPHILS PATHWAY | amb2 Integrin signaling |
0.0 | 1.0 | PID AR PATHWAY | Coregulation of Androgen receptor activity |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.7 | REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS | Genes involved in Golgi Associated Vesicle Biogenesis |
0.0 | 2.8 | REACTOME TRANSPORT OF INORGANIC CATIONS ANIONS AND AMINO ACIDS OLIGOPEPTIDES | Genes involved in Transport of inorganic cations/anions and amino acids/oligopeptides |
0.0 | 2.1 | REACTOME BMAL1 CLOCK NPAS2 ACTIVATES CIRCADIAN EXPRESSION | Genes involved in BMAL1:CLOCK/NPAS2 Activates Circadian Expression |
0.1 | 2.0 | REACTOME PURINE RIBONUCLEOSIDE MONOPHOSPHATE BIOSYNTHESIS | Genes involved in Purine ribonucleoside monophosphate biosynthesis |
0.0 | 1.8 | REACTOME SEMA4D IN SEMAPHORIN SIGNALING | Genes involved in Sema4D in semaphorin signaling |
0.1 | 1.7 | REACTOME ZINC TRANSPORTERS | Genes involved in Zinc transporters |
0.0 | 1.7 | REACTOME METABOLISM OF VITAMINS AND COFACTORS | Genes involved in Metabolism of vitamins and cofactors |
0.0 | 1.7 | REACTOME MRNA SPLICING | Genes involved in mRNA Splicing |
0.1 | 1.5 | REACTOME CYCLIN A B1 ASSOCIATED EVENTS DURING G2 M TRANSITION | Genes involved in Cyclin A/B1 associated events during G2/M transition |
0.0 | 1.5 | REACTOME CELL DEATH SIGNALLING VIA NRAGE NRIF AND NADE | Genes involved in Cell death signalling via NRAGE, NRIF and NADE |