avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Myb | mm10_v2_chr10_-_21160925_21160984 | 0.81 | 2.4e-09 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr6_+_86078070 Show fit | 23.24 |
ENSMUST00000032069.5
|
adducin 2 (beta) |
|
chr10_+_79886302 Show fit | 17.26 |
ENSMUST00000046091.5
|
elastase, neutrophil expressed |
|
chr11_+_58640394 Show fit | 16.55 |
ENSMUST00000075084.4
|
tripartite motif-containing 58 |
|
chr9_+_72438519 Show fit | 16.07 |
ENSMUST00000184604.1
|
meiosis-specific nuclear structural protein 1 |
|
chr9_+_72438534 Show fit | 15.41 |
ENSMUST00000034746.8
|
meiosis-specific nuclear structural protein 1 |
|
chr17_-_48451510 Show fit | 15.31 |
ENSMUST00000024794.5
|
translocator protein 2 |
|
chr5_+_123749696 Show fit | 12.15 |
ENSMUST00000031366.7
|
kinetochore associated 1 |
|
chr11_+_87793470 Show fit | 11.94 |
ENSMUST00000020779.4
|
myeloperoxidase |
|
chr11_+_87793722 Show fit | 11.24 |
ENSMUST00000143021.2
|
myeloperoxidase |
|
chr2_-_127831817 Show fit | 11.02 |
ENSMUST00000028858.7
|
budding uninhibited by benzimidazoles 1 homolog (S. cerevisiae) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.8 | 32.5 | GO:0051988 | regulation of attachment of spindle microtubules to kinetochore(GO:0051988) |
4.5 | 31.5 | GO:0035735 | intraciliary transport involved in cilium morphogenesis(GO:0035735) |
1.7 | 31.5 | GO:0070986 | left/right axis specification(GO:0070986) |
7.7 | 23.2 | GO:0002149 | hypochlorous acid metabolic process(GO:0002148) hypochlorous acid biosynthetic process(GO:0002149) |
0.9 | 23.2 | GO:0050901 | leukocyte tethering or rolling(GO:0050901) |
0.0 | 22.5 | GO:0051301 | cell division(GO:0051301) |
1.2 | 21.0 | GO:0030953 | astral microtubule organization(GO:0030953) |
0.5 | 20.9 | GO:0007339 | binding of sperm to zona pellucida(GO:0007339) |
6.3 | 19.0 | GO:0072382 | minus-end-directed vesicle transport along microtubule(GO:0072382) |
5.8 | 17.3 | GO:0045079 | negative regulation of chemokine biosynthetic process(GO:0045079) neutrophil mediated killing of fungus(GO:0070947) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 50.3 | GO:0036126 | sperm flagellum(GO:0036126) |
1.1 | 35.4 | GO:0034451 | centriolar satellite(GO:0034451) |
0.8 | 29.5 | GO:0035371 | microtubule plus-end(GO:0035371) |
0.3 | 26.1 | GO:0005814 | centriole(GO:0005814) |
0.0 | 23.3 | GO:0005730 | nucleolus(GO:0005730) |
2.3 | 23.2 | GO:0008290 | F-actin capping protein complex(GO:0008290) |
1.4 | 23.2 | GO:0005766 | primary lysosome(GO:0005766) azurophil granule(GO:0042582) |
0.2 | 19.6 | GO:0000776 | kinetochore(GO:0000776) |
0.3 | 19.5 | GO:0005871 | kinesin complex(GO:0005871) |
0.9 | 19.0 | GO:0031616 | spindle pole centrosome(GO:0031616) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 33.9 | GO:0019904 | protein domain specific binding(GO:0019904) |
0.3 | 22.5 | GO:0030507 | spectrin binding(GO:0030507) |
0.1 | 22.5 | GO:0061630 | ubiquitin protein ligase activity(GO:0061630) |
0.1 | 20.3 | GO:0042393 | histone binding(GO:0042393) |
0.3 | 19.7 | GO:0004601 | peroxidase activity(GO:0004601) |
0.7 | 19.5 | GO:0008569 | ATP-dependent microtubule motor activity, minus-end-directed(GO:0008569) |
0.3 | 19.5 | GO:0003777 | microtubule motor activity(GO:0003777) |
0.5 | 19.1 | GO:0001106 | RNA polymerase II transcription corepressor activity(GO:0001106) |
0.0 | 18.3 | GO:0004674 | protein serine/threonine kinase activity(GO:0004674) |
1.1 | 16.3 | GO:0030346 | protein phosphatase 2B binding(GO:0030346) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.8 | 42.3 | PID AURORA B PATHWAY | Aurora B signaling |
0.5 | 23.6 | PID PLK1 PATHWAY | PLK1 signaling events |
0.5 | 23.2 | PID IL23 PATHWAY | IL23-mediated signaling events |
0.6 | 21.0 | PID AURORA A PATHWAY | Aurora A signaling |
0.4 | 17.3 | PID UPA UPAR PATHWAY | Urokinase-type plasminogen activator (uPA) and uPAR-mediated signaling |
0.1 | 12.9 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.2 | 12.5 | PID MYC REPRESS PATHWAY | Validated targets of C-MYC transcriptional repression |
0.6 | 12.3 | PID TCR RAS PATHWAY | Ras signaling in the CD4+ TCR pathway |
0.2 | 10.4 | SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES | Genes related to regulation of the actin cytoskeleton |
0.1 | 8.6 | PID HDAC CLASSII PATHWAY | Signaling events mediated by HDAC Class II |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 70.7 | REACTOME MITOTIC PROMETAPHASE | Genes involved in Mitotic Prometaphase |
1.1 | 31.0 | REACTOME KINESINS | Genes involved in Kinesins |
0.6 | 17.3 | REACTOME DEGRADATION OF THE EXTRACELLULAR MATRIX | Genes involved in Degradation of the extracellular matrix |
0.3 | 11.5 | REACTOME ACTIVATION OF ATR IN RESPONSE TO REPLICATION STRESS | Genes involved in Activation of ATR in response to replication stress |
0.3 | 10.7 | REACTOME MRNA SPLICING MINOR PATHWAY | Genes involved in mRNA Splicing - Minor Pathway |
0.1 | 8.8 | REACTOME NOTCH1 INTRACELLULAR DOMAIN REGULATES TRANSCRIPTION | Genes involved in NOTCH1 Intracellular Domain Regulates Transcription |
0.2 | 8.2 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.8 | 7.2 | REACTOME ACTIVATION OF CHAPERONE GENES BY ATF6 ALPHA | Genes involved in Activation of Chaperone Genes by ATF6-alpha |
0.2 | 7.2 | REACTOME BASIGIN INTERACTIONS | Genes involved in Basigin interactions |
0.2 | 6.4 | REACTOME PREFOLDIN MEDIATED TRANSFER OF SUBSTRATE TO CCT TRIC | Genes involved in Prefoldin mediated transfer of substrate to CCT/TriC |