avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Myf6 | mm10_v2_chr10_-_107494719_107494742 | -0.39 | 1.8e-02 | Click! |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
3.9 | 42.4 | GO:0071394 | cellular response to testosterone stimulus(GO:0071394) |
1.7 | 30.5 | GO:0045717 | negative regulation of fatty acid biosynthetic process(GO:0045717) |
0.8 | 22.0 | GO:0035634 | response to stilbenoid(GO:0035634) |
3.3 | 19.5 | GO:1904075 | regulation of trophectodermal cell proliferation(GO:1904073) positive regulation of trophectodermal cell proliferation(GO:1904075) |
0.4 | 16.9 | GO:0048384 | retinoic acid receptor signaling pathway(GO:0048384) |
0.7 | 14.5 | GO:0043567 | regulation of insulin-like growth factor receptor signaling pathway(GO:0043567) |
1.6 | 14.0 | GO:1900034 | regulation of cellular response to heat(GO:1900034) |
0.3 | 13.7 | GO:0002474 | antigen processing and presentation of peptide antigen via MHC class I(GO:0002474) |
2.5 | 12.6 | GO:0006987 | activation of signaling protein activity involved in unfolded protein response(GO:0006987) |
3.9 | 11.7 | GO:1903048 | regulation of acetylcholine-gated cation channel activity(GO:1903048) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
3.1 | 25.2 | GO:0032937 | SREBP-SCAP-Insig complex(GO:0032937) |
1.9 | 24.2 | GO:0097418 | neurofibrillary tangle(GO:0097418) |
1.9 | 22.3 | GO:0042612 | MHC class I protein complex(GO:0042612) |
2.2 | 19.7 | GO:0035867 | alphav-beta3 integrin-IGF-1-IGF1R complex(GO:0035867) |
0.0 | 15.5 | GO:0005740 | mitochondrial envelope(GO:0005740) |
0.6 | 12.8 | GO:0005892 | acetylcholine-gated channel complex(GO:0005892) |
0.3 | 11.6 | GO:0032809 | neuronal cell body membrane(GO:0032809) |
0.0 | 10.0 | GO:0045211 | postsynaptic membrane(GO:0045211) |
0.5 | 9.8 | GO:0016514 | SWI/SNF complex(GO:0016514) |
0.7 | 9.4 | GO:0034663 | endoplasmic reticulum chaperone complex(GO:0034663) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.9 | 24.2 | GO:0030881 | beta-2-microglobulin binding(GO:0030881) |
1.0 | 23.1 | GO:0005550 | pheromone binding(GO:0005550) |
0.6 | 22.9 | GO:0005159 | insulin-like growth factor receptor binding(GO:0005159) |
7.1 | 21.3 | GO:0005009 | insulin-activated receptor activity(GO:0005009) pheromone activity(GO:0005186) |
0.8 | 18.3 | GO:0051787 | misfolded protein binding(GO:0051787) |
0.1 | 18.2 | GO:0061630 | ubiquitin protein ligase activity(GO:0061630) |
1.8 | 17.5 | GO:0004886 | 9-cis retinoic acid receptor activity(GO:0004886) |
0.1 | 16.4 | GO:0008168 | methyltransferase activity(GO:0008168) |
0.3 | 14.6 | GO:0046875 | ephrin receptor binding(GO:0046875) |
2.0 | 14.0 | GO:0099609 | microtubule lateral binding(GO:0099609) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 22.8 | PID RXR VDR PATHWAY | RXR and RAR heterodimerization with other nuclear receptor |
0.4 | 21.2 | PID IGF1 PATHWAY | IGF1 pathway |
0.4 | 16.5 | PID NECTIN PATHWAY | Nectin adhesion pathway |
0.8 | 14.9 | PID P38 GAMMA DELTA PATHWAY | Signaling mediated by p38-gamma and p38-delta |
0.2 | 10.9 | PID CASPASE PATHWAY | Caspase cascade in apoptosis |
0.2 | 10.7 | PID AR TF PATHWAY | Regulation of Androgen receptor activity |
0.1 | 9.3 | PID TAP63 PATHWAY | Validated transcriptional targets of TAp63 isoforms |
0.5 | 9.2 | PID ERB GENOMIC PATHWAY | Validated nuclear estrogen receptor beta network |
0.2 | 7.6 | PID IL1 PATHWAY | IL1-mediated signaling events |
0.0 | 6.9 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 34.5 | REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY | Genes involved in Nuclear Receptor transcription pathway |
1.0 | 29.4 | REACTOME CASPASE MEDIATED CLEAVAGE OF CYTOSKELETAL PROTEINS | Genes involved in Caspase-mediated cleavage of cytoskeletal proteins |
0.5 | 19.1 | REACTOME ADHERENS JUNCTIONS INTERACTIONS | Genes involved in Adherens junctions interactions |
1.0 | 13.5 | REACTOME PRESYNAPTIC NICOTINIC ACETYLCHOLINE RECEPTORS | Genes involved in Presynaptic nicotinic acetylcholine receptors |
1.0 | 12.6 | REACTOME SYNTHESIS OF BILE ACIDS AND BILE SALTS VIA 24 HYDROXYCHOLESTEROL | Genes involved in Synthesis of bile acids and bile salts via 24-hydroxycholesterol |
0.6 | 11.7 | REACTOME REGULATION OF INSULIN LIKE GROWTH FACTOR IGF ACTIVITY BY INSULIN LIKE GROWTH FACTOR BINDING PROTEINS IGFBPS | Genes involved in Regulation of Insulin-like Growth Factor (IGF) Activity by Insulin-like Growth Factor Binding Proteins (IGFBPs) |
0.5 | 9.1 | REACTOME GABA A RECEPTOR ACTIVATION | Genes involved in GABA A receptor activation |
0.1 | 9.0 | REACTOME G ALPHA S SIGNALLING EVENTS | Genes involved in G alpha (s) signalling events |
0.4 | 8.9 | REACTOME CYTOCHROME P450 ARRANGED BY SUBSTRATE TYPE | Genes involved in Cytochrome P450 - arranged by substrate type |
0.2 | 8.6 | REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS | Genes involved in Sphingolipid de novo biosynthesis |