avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Nanog | mm10_v2_chr6_+_122707489_122707608 | 0.17 | 3.2e-01 | Click! |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 28.2 | GO:0007586 | digestion(GO:0007586) |
0.9 | 13.5 | GO:0015816 | glycine transport(GO:0015816) |
0.6 | 10.7 | GO:0030953 | astral microtubule organization(GO:0030953) |
0.9 | 9.3 | GO:0002441 | histamine production involved in inflammatory response(GO:0002349) histamine secretion involved in inflammatory response(GO:0002441) histamine secretion by mast cell(GO:0002553) |
2.1 | 8.6 | GO:0035524 | proline transmembrane transport(GO:0035524) |
2.5 | 7.5 | GO:0033861 | negative regulation of NAD(P)H oxidase activity(GO:0033861) neuron projection maintenance(GO:1990535) |
0.8 | 6.8 | GO:2000346 | negative regulation of hepatocyte proliferation(GO:2000346) |
1.9 | 5.6 | GO:0072488 | ammonium transmembrane transport(GO:0072488) |
0.5 | 5.2 | GO:0030916 | otic vesicle formation(GO:0030916) |
0.2 | 5.2 | GO:0008340 | determination of adult lifespan(GO:0008340) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 38.3 | GO:0005887 | integral component of plasma membrane(GO:0005887) |
0.3 | 8.4 | GO:0005732 | small nucleolar ribonucleoprotein complex(GO:0005732) |
0.0 | 6.4 | GO:0005911 | cell-cell junction(GO:0005911) |
0.0 | 5.3 | GO:0005578 | proteinaceous extracellular matrix(GO:0005578) |
0.0 | 4.7 | GO:0005913 | cell-cell adherens junction(GO:0005913) |
0.0 | 4.1 | GO:0016328 | lateral plasma membrane(GO:0016328) |
0.0 | 4.1 | GO:0032993 | protein-DNA complex(GO:0032993) |
0.0 | 3.9 | GO:0009898 | cytoplasmic side of plasma membrane(GO:0009898) |
0.3 | 3.6 | GO:0098643 | fibrillar collagen trimer(GO:0005583) banded collagen fibril(GO:0098643) |
0.3 | 3.4 | GO:0033093 | Weibel-Palade body(GO:0033093) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 31.1 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
1.3 | 13.5 | GO:0015187 | glycine transmembrane transporter activity(GO:0015187) |
1.1 | 11.8 | GO:0001609 | G-protein coupled adenosine receptor activity(GO:0001609) |
1.0 | 11.0 | GO:0015193 | L-proline transmembrane transporter activity(GO:0015193) |
0.0 | 8.4 | GO:0005525 | GTP binding(GO:0005525) |
0.2 | 6.7 | GO:0005159 | insulin-like growth factor receptor binding(GO:0005159) |
0.8 | 5.8 | GO:0004027 | alcohol sulfotransferase activity(GO:0004027) |
0.0 | 5.7 | GO:0001078 | transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001078) |
0.3 | 5.6 | GO:0022842 | leak channel activity(GO:0022840) narrow pore channel activity(GO:0022842) |
0.2 | 4.7 | GO:0008510 | sodium:bicarbonate symporter activity(GO:0008510) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 12.8 | PID AURORA A PATHWAY | Aurora A signaling |
0.1 | 8.3 | PID SYNDECAN 1 PATHWAY | Syndecan-1-mediated signaling events |
0.0 | 7.2 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.1 | 6.2 | PID ILK PATHWAY | Integrin-linked kinase signaling |
0.1 | 5.5 | PID CDC42 PATHWAY | CDC42 signaling events |
0.1 | 5.3 | PID RB 1PATHWAY | Regulation of retinoblastoma protein |
0.1 | 3.6 | PID TOLL ENDOGENOUS PATHWAY | Endogenous TLR signaling |
0.0 | 3.2 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.1 | 2.9 | PID AURORA B PATHWAY | Aurora B signaling |
0.0 | 2.6 | PID CMYB PATHWAY | C-MYB transcription factor network |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 16.4 | REACTOME AMINO ACID TRANSPORT ACROSS THE PLASMA MEMBRANE | Genes involved in Amino acid transport across the plasma membrane |
0.5 | 15.4 | REACTOME DEGRADATION OF THE EXTRACELLULAR MATRIX | Genes involved in Degradation of the extracellular matrix |
0.6 | 11.6 | REACTOME NUCLEOTIDE LIKE PURINERGIC RECEPTORS | Genes involved in Nucleotide-like (purinergic) receptors |
0.1 | 9.2 | REACTOME TRANSPORT OF INORGANIC CATIONS ANIONS AND AMINO ACIDS OLIGOPEPTIDES | Genes involved in Transport of inorganic cations/anions and amino acids/oligopeptides |
0.1 | 7.9 | REACTOME MITOTIC PROMETAPHASE | Genes involved in Mitotic Prometaphase |
0.3 | 6.8 | REACTOME CELL EXTRACELLULAR MATRIX INTERACTIONS | Genes involved in Cell-extracellular matrix interactions |
0.2 | 6.1 | REACTOME AMINE COMPOUND SLC TRANSPORTERS | Genes involved in Amine compound SLC transporters |
0.1 | 5.7 | REACTOME O LINKED GLYCOSYLATION OF MUCINS | Genes involved in O-linked glycosylation of mucins |
0.3 | 4.7 | REACTOME PLATELET ADHESION TO EXPOSED COLLAGEN | Genes involved in Platelet Adhesion to exposed collagen |
0.3 | 3.6 | REACTOME CS DS DEGRADATION | Genes involved in CS/DS degradation |