avrg: GSE58827: Dynamics of the Mouse Liver
Gene Symbol | Gene ID | Gene Info |
---|---|---|
ENSMUSG00000038255.6 | neurogenic differentiation 2 | |
ENSMUSG00000052271.7 | basic helix-loop-helix family, member a15 | |
ENSMUSG00000025128.6 | basic helix-loop-helix family, member e22 | |
ENSMUSG00000046160.5 | oligodendrocyte transcription factor 1 |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Olig1 | mm10_v2_chr16_+_91269759_91269778 | 0.38 | 2.4e-02 | Click! |
Bhlhe22 | mm10_v2_chr3_+_18054258_18054325 | -0.35 | 3.6e-02 | Click! |
Bhlha15 | mm10_v2_chr5_+_144190284_144190334 | -0.23 | 1.8e-01 | Click! |
Neurod2 | mm10_v2_chr11_-_98329641_98329654 | -0.03 | 8.8e-01 | Click! |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.3 | 5.1 | GO:2001106 | regulation of Rho guanyl-nucleotide exchange factor activity(GO:2001106) |
0.8 | 4.7 | GO:1904075 | regulation of trophectodermal cell proliferation(GO:1904073) positive regulation of trophectodermal cell proliferation(GO:1904075) |
0.1 | 3.6 | GO:0032728 | positive regulation of interferon-beta production(GO:0032728) |
0.8 | 3.3 | GO:0042851 | L-alanine metabolic process(GO:0042851) |
0.2 | 3.0 | GO:0031272 | regulation of pseudopodium assembly(GO:0031272) |
0.0 | 2.8 | GO:0046889 | positive regulation of lipid biosynthetic process(GO:0046889) |
0.3 | 2.3 | GO:2000298 | regulation of Rho-dependent protein serine/threonine kinase activity(GO:2000298) |
0.0 | 1.6 | GO:0000045 | autophagosome assembly(GO:0000045) |
0.2 | 1.5 | GO:0035887 | aortic smooth muscle cell differentiation(GO:0035887) |
0.1 | 1.2 | GO:0006744 | ubiquinone biosynthetic process(GO:0006744) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 4.7 | GO:0035867 | alphav-beta3 integrin-IGF-1-IGF1R complex(GO:0035867) insulin-like growth factor ternary complex(GO:0042567) |
0.2 | 3.0 | GO:0031143 | pseudopodium(GO:0031143) |
0.0 | 2.7 | GO:0005811 | lipid particle(GO:0005811) |
0.0 | 1.8 | GO:0005776 | autophagosome(GO:0005776) |
0.0 | 1.7 | GO:0097517 | stress fiber(GO:0001725) contractile actin filament bundle(GO:0097517) |
0.0 | 1.6 | GO:0000800 | lateral element(GO:0000800) |
0.1 | 1.5 | GO:0071564 | npBAF complex(GO:0071564) |
0.0 | 1.3 | GO:0045171 | intercellular bridge(GO:0045171) |
0.0 | 0.9 | GO:0022627 | cytosolic small ribosomal subunit(GO:0022627) |
0.1 | 0.7 | GO:0044316 | cone cell pedicle(GO:0044316) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.7 | GO:0005159 | insulin-like growth factor receptor binding(GO:0005159) |
0.0 | 3.5 | GO:0001078 | transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001078) |
0.1 | 3.3 | GO:0008483 | transaminase activity(GO:0008483) |
0.0 | 2.9 | GO:0008236 | serine-type peptidase activity(GO:0008236) |
0.1 | 2.1 | GO:0051371 | muscle alpha-actinin binding(GO:0051371) |
0.0 | 2.0 | GO:0004222 | metalloendopeptidase activity(GO:0004222) |
0.0 | 1.8 | GO:0035035 | histone acetyltransferase binding(GO:0035035) |
0.0 | 1.8 | GO:0043130 | ubiquitin binding(GO:0043130) |
0.1 | 1.7 | GO:0004745 | retinol dehydrogenase activity(GO:0004745) |
0.0 | 1.4 | GO:0098811 | transcriptional activator activity, RNA polymerase II transcription factor binding(GO:0001190) transcriptional repressor activity, RNA polymerase II activating transcription factor binding(GO:0098811) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.7 | PID IGF1 PATHWAY | IGF1 pathway |
0.0 | 2.6 | PID AR TF PATHWAY | Regulation of Androgen receptor activity |
0.0 | 0.5 | NABA BASEMENT MEMBRANES | Genes encoding structural components of basement membranes |
0.0 | 0.4 | PID NEPHRIN NEPH1 PATHWAY | Nephrin/Neph1 signaling in the kidney podocyte |
0.0 | 0.3 | PID ANTHRAX PATHWAY | Cellular roles of Anthrax toxin |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.1 | REACTOME AMINO ACID SYNTHESIS AND INTERCONVERSION TRANSAMINATION | Genes involved in Amino acid synthesis and interconversion (transamination) |
0.1 | 1.0 | REACTOME ENDOGENOUS STEROLS | Genes involved in Endogenous sterols |
0.0 | 0.9 | REACTOME INTRINSIC PATHWAY | Genes involved in Intrinsic Pathway |
0.0 | 0.7 | REACTOME RAP1 SIGNALLING | Genes involved in Rap1 signalling |
0.0 | 0.6 | REACTOME PTM GAMMA CARBOXYLATION HYPUSINE FORMATION AND ARYLSULFATASE ACTIVATION | Genes involved in PTM: gamma carboxylation, hypusine formation and arylsulfatase activation |
0.0 | 0.6 | REACTOME NEPHRIN INTERACTIONS | Genes involved in Nephrin interactions |
0.0 | 0.3 | REACTOME SYNTHESIS OF PE | Genes involved in Synthesis of PE |
0.0 | 0.3 | REACTOME JNK C JUN KINASES PHOSPHORYLATION AND ACTIVATION MEDIATED BY ACTIVATED HUMAN TAK1 | Genes involved in JNK (c-Jun kinases) phosphorylation and activation mediated by activated human TAK1 |
0.0 | 0.3 | REACTOME ACTIVATED POINT MUTANTS OF FGFR2 | Genes involved in Activated point mutants of FGFR2 |
0.0 | 0.2 | REACTOME REGULATION OF RHEB GTPASE ACTIVITY BY AMPK | Genes involved in Regulation of Rheb GTPase activity by AMPK |