avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Nfatc2 | mm10_v2_chr2_-_168601620_168601657 | 0.28 | 9.6e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr6_-_41035501 Show fit | 2.51 |
ENSMUST00000031931.5
|
RIKEN cDNA 2210010C04 gene |
|
chr6_-_59024340 Show fit | 1.99 |
ENSMUST00000173193.1
|
family with sequence similarity 13, member A |
|
chr19_+_58670358 Show fit | 1.74 |
ENSMUST00000057270.7
|
pancreatic lipase |
|
chr4_-_137430517 Show fit | 1.73 |
ENSMUST00000102522.4
|
chymotrypsin-like elastase family, member 3B |
|
chr19_-_5845471 Show fit | 1.63 |
ENSMUST00000174287.1
ENSMUST00000173672.1 |
nuclear paraspeckle assembly transcript 1 (non-protein coding) |
|
chr5_-_62765618 Show fit | 1.56 |
ENSMUST00000159470.1
|
ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 |
|
chr3_-_75270073 Show fit | 1.54 |
ENSMUST00000039047.4
|
serine (or cysteine) peptidase inhibitor, clade I, member 2 |
|
chr3_-_113532288 Show fit | 1.51 |
ENSMUST00000132353.1
|
amylase 2a1 |
|
chr19_-_5796924 Show fit | 1.47 |
ENSMUST00000174808.1
|
metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) |
|
chr15_+_90224293 Show fit | 1.46 |
ENSMUST00000100309.1
|
asparagine-linked glycosylation 10B (alpha-1,2-glucosyltransferase) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 2.4 | GO:0035063 | nuclear speck organization(GO:0035063) |
0.1 | 2.2 | GO:0015701 | bicarbonate transport(GO:0015701) |
0.0 | 2.2 | GO:0046326 | positive regulation of glucose import(GO:0046326) |
0.4 | 2.1 | GO:0060849 | regulation of transcription involved in lymphatic endothelial cell fate commitment(GO:0060849) |
0.0 | 2.1 | GO:0003301 | physiological muscle hypertrophy(GO:0003298) physiological cardiac muscle hypertrophy(GO:0003301) cell growth involved in cardiac muscle cell development(GO:0061049) |
0.4 | 1.8 | GO:2000182 | regulation of progesterone biosynthetic process(GO:2000182) |
0.3 | 1.8 | GO:0038161 | prolactin signaling pathway(GO:0038161) |
0.1 | 1.8 | GO:2000653 | regulation of genetic imprinting(GO:2000653) |
0.1 | 1.8 | GO:0071378 | growth hormone receptor signaling pathway(GO:0060396) cellular response to growth hormone stimulus(GO:0071378) |
0.0 | 1.8 | GO:0051453 | regulation of intracellular pH(GO:0051453) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 5.1 | GO:0016323 | basolateral plasma membrane(GO:0016323) |
0.0 | 3.8 | GO:0031225 | anchored component of membrane(GO:0031225) |
0.0 | 2.5 | GO:0043034 | costamere(GO:0043034) |
0.0 | 2.5 | GO:0044295 | axonal growth cone(GO:0044295) |
0.0 | 2.4 | GO:0005923 | bicellular tight junction(GO:0005923) |
0.1 | 2.2 | GO:0005605 | basal lamina(GO:0005605) |
0.1 | 1.9 | GO:0030877 | beta-catenin destruction complex(GO:0030877) |
0.0 | 1.9 | GO:0097440 | apical dendrite(GO:0097440) |
0.2 | 1.7 | GO:0042382 | paraspeckles(GO:0042382) |
0.0 | 1.7 | GO:0030864 | cortical actin cytoskeleton(GO:0030864) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 6.9 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.2 | 4.0 | GO:0008510 | sodium:bicarbonate symporter activity(GO:0008510) |
0.0 | 3.5 | GO:0017124 | SH3 domain binding(GO:0017124) |
0.1 | 3.0 | GO:0004181 | metallocarboxypeptidase activity(GO:0004181) |
0.0 | 2.5 | GO:0004386 | helicase activity(GO:0004386) |
0.1 | 2.4 | GO:0042975 | peroxisome proliferator activated receptor binding(GO:0042975) |
0.0 | 2.2 | GO:0005089 | Rho guanyl-nucleotide exchange factor activity(GO:0005089) |
0.1 | 2.1 | GO:0005537 | mannose binding(GO:0005537) |
0.1 | 2.0 | GO:0005078 | MAP-kinase scaffold activity(GO:0005078) |
0.4 | 1.8 | GO:0004925 | prolactin receptor activity(GO:0004925) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.5 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.0 | 3.2 | PID HDAC CLASSI PATHWAY | Signaling events mediated by HDAC Class I |
0.0 | 2.8 | PID P38 ALPHA BETA DOWNSTREAM PATHWAY | Signaling mediated by p38-alpha and p38-beta |
0.0 | 2.2 | PID ARF6 TRAFFICKING PATHWAY | Arf6 trafficking events |
0.1 | 2.1 | PID INTEGRIN A9B1 PATHWAY | Alpha9 beta1 integrin signaling events |
0.1 | 2.0 | PID INTEGRIN A4B1 PATHWAY | Alpha4 beta1 integrin signaling events |
0.0 | 2.0 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.1 | 1.9 | PID BETA CATENIN DEG PATHWAY | Degradation of beta catenin |
0.0 | 1.7 | PID CDC42 REG PATHWAY | Regulation of CDC42 activity |
0.0 | 1.7 | PID ATM PATHWAY | ATM pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 6.5 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.0 | 5.7 | REACTOME TRANSPORT OF INORGANIC CATIONS ANIONS AND AMINO ACIDS OLIGOPEPTIDES | Genes involved in Transport of inorganic cations/anions and amino acids/oligopeptides |
0.1 | 3.5 | REACTOME CIRCADIAN REPRESSION OF EXPRESSION BY REV ERBA | Genes involved in Circadian Repression of Expression by REV-ERBA |
0.0 | 3.3 | REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY | Genes involved in Nuclear Receptor transcription pathway |
0.1 | 2.6 | REACTOME IRON UPTAKE AND TRANSPORT | Genes involved in Iron uptake and transport |
0.1 | 2.1 | REACTOME CELL EXTRACELLULAR MATRIX INTERACTIONS | Genes involved in Cell-extracellular matrix interactions |
0.1 | 1.8 | REACTOME PROLACTIN RECEPTOR SIGNALING | Genes involved in Prolactin receptor signaling |
0.1 | 1.6 | REACTOME HOMOLOGOUS RECOMBINATION REPAIR OF REPLICATION INDEPENDENT DOUBLE STRAND BREAKS | Genes involved in Homologous recombination repair of replication-independent double-strand breaks |
0.1 | 1.6 | REACTOME CTNNB1 PHOSPHORYLATION CASCADE | Genes involved in Beta-catenin phosphorylation cascade |
0.0 | 1.6 | REACTOME MUSCLE CONTRACTION | Genes involved in Muscle contraction |