avrg: GSE58827: Dynamics of the Mouse Liver
Gene Symbol | Gene ID | Gene Info |
---|---|---|
ENSMUSG00000038615.11 | nuclear factor, erythroid derived 2,-like 1 | |
ENSMUSG00000051510.7 | v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian) | |
ENSMUSG00000053906.4 | v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian) |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Mafg | mm10_v2_chr11_-_120630126_120630160 | 0.56 | 3.5e-04 | Click! |
Nfe2l1 | mm10_v2_chr11_-_96829483_96829502 | -0.41 | 1.2e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chrX_-_49788204 Show fit | 3.75 |
ENSMUST00000114893.1
|
immunoglobulin superfamily, member 1 |
|
chr1_+_174158722 Show fit | 3.40 |
ENSMUST00000068403.3
|
olfactory receptor 420 |
|
chr5_-_107726017 Show fit | 3.07 |
ENSMUST00000159263.2
|
growth factor independent 1 |
|
chr1_-_133753681 Show fit | 2.49 |
ENSMUST00000125659.1
ENSMUST00000165602.2 ENSMUST00000048953.7 |
ATPase, Ca++ transporting, plasma membrane 4 |
|
chr1_+_174041933 Show fit | 2.49 |
ENSMUST00000052975.4
|
olfactory receptor 433 |
|
chr3_+_157566868 Show fit | 2.36 |
ENSMUST00000041175.6
ENSMUST00000173533.1 |
prostaglandin E receptor 3 (subtype EP3) |
|
chr1_-_82768449 Show fit | 2.27 |
ENSMUST00000027331.2
|
transmembrane 4 L six family member 20 |
|
chr17_+_70929006 Show fit | 2.14 |
ENSMUST00000092011.6
|
predicted gene, 16519 |
|
chr7_-_116038734 Show fit | 2.09 |
ENSMUST00000166877.1
|
SRY-box containing gene 6 |
|
chr1_-_132367879 Show fit | 1.94 |
ENSMUST00000142609.1
|
transmembrane and coiled-coil domains 2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 5.6 | GO:0050907 | detection of chemical stimulus involved in sensory perception(GO:0050907) |
0.6 | 3.1 | GO:0010956 | negative regulation of calcidiol 1-monooxygenase activity(GO:0010956) regulation of interleukin-6-mediated signaling pathway(GO:0070103) |
0.2 | 3.0 | GO:1904659 | glucose transmembrane transport(GO:1904659) |
0.8 | 2.5 | GO:0000821 | regulation of arginine metabolic process(GO:0000821) negative regulation of nitric oxide mediated signal transduction(GO:0010751) negative regulation of cellular amino acid metabolic process(GO:0045763) |
0.8 | 2.4 | GO:1990764 | gastrin-induced gastric acid secretion(GO:0001698) positive regulation of actin filament-based movement(GO:1903116) regulation of myofibroblast contraction(GO:1904328) myofibroblast contraction(GO:1990764) negative regulation of forebrain neuron differentiation(GO:2000978) |
0.2 | 2.4 | GO:2000042 | negative regulation of double-strand break repair via homologous recombination(GO:2000042) |
0.2 | 2.1 | GO:2000741 | positive regulation of mesenchymal stem cell differentiation(GO:2000741) |
0.0 | 2.0 | GO:0007608 | sensory perception of smell(GO:0007608) |
0.2 | 1.9 | GO:2000786 | positive regulation of autophagosome assembly(GO:2000786) |
0.0 | 1.9 | GO:0042982 | amyloid precursor protein metabolic process(GO:0042982) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.2 | GO:0016363 | nuclear matrix(GO:0016363) |
0.1 | 2.5 | GO:0097228 | sperm principal piece(GO:0097228) |
0.5 | 2.4 | GO:1990769 | proximal neuron projection(GO:1990769) |
0.1 | 2.3 | GO:0035861 | site of double-strand break(GO:0035861) |
0.1 | 1.7 | GO:0070852 | cell body fiber(GO:0070852) |
0.0 | 1.7 | GO:0002102 | podosome(GO:0002102) |
0.0 | 1.6 | GO:0030863 | cortical cytoskeleton(GO:0030863) |
0.2 | 1.5 | GO:0031428 | box C/D snoRNP complex(GO:0031428) |
0.0 | 1.4 | GO:0045095 | keratin filament(GO:0045095) |
0.0 | 1.4 | GO:0016605 | PML body(GO:0016605) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 6.5 | GO:0004984 | olfactory receptor activity(GO:0004984) |
0.0 | 6.4 | GO:0001078 | transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001078) |
0.4 | 3.7 | GO:0034711 | inhibin binding(GO:0034711) |
0.2 | 3.1 | GO:0030235 | nitric-oxide synthase regulator activity(GO:0030235) |
0.3 | 2.4 | GO:0004957 | prostaglandin E receptor activity(GO:0004957) |
0.2 | 2.4 | GO:0004993 | G-protein coupled serotonin receptor activity(GO:0004993) |
0.4 | 2.3 | GO:0061649 | ubiquitinated histone binding(GO:0061649) |
0.6 | 1.9 | GO:0016309 | 1-phosphatidylinositol-5-phosphate 4-kinase activity(GO:0016309) |
0.0 | 1.7 | GO:0030676 | Rac guanyl-nucleotide exchange factor activity(GO:0030676) |
0.1 | 1.6 | GO:0005041 | low-density lipoprotein receptor activity(GO:0005041) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.7 | PID REELIN PATHWAY | Reelin signaling pathway |
0.0 | 1.1 | PID MYC REPRESS PATHWAY | Validated targets of C-MYC transcriptional repression |
0.0 | 1.0 | PID E2F PATHWAY | E2F transcription factor network |
0.0 | 1.0 | PID TELOMERASE PATHWAY | Regulation of Telomerase |
0.0 | 0.8 | PID NECTIN PATHWAY | Nectin adhesion pathway |
0.0 | 0.8 | ST TUMOR NECROSIS FACTOR PATHWAY | Tumor Necrosis Factor Pathway. |
0.0 | 0.8 | PID AP1 PATHWAY | AP-1 transcription factor network |
0.0 | 0.6 | PID HIF1A PATHWAY | Hypoxic and oxygen homeostasis regulation of HIF-1-alpha |
0.0 | 0.4 | PID LPA4 PATHWAY | LPA4-mediated signaling events |
0.0 | 0.4 | PID P38 MKK3 6PATHWAY | p38 MAPK signaling pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 2.4 | REACTOME PROSTANOID LIGAND RECEPTORS | Genes involved in Prostanoid ligand receptors |
0.0 | 1.9 | REACTOME SYNTHESIS OF PIPS AT THE PLASMA MEMBRANE | Genes involved in Synthesis of PIPs at the plasma membrane |
0.0 | 1.7 | REACTOME NRAGE SIGNALS DEATH THROUGH JNK | Genes involved in NRAGE signals death through JNK |
0.0 | 1.6 | REACTOME ASSOCIATION OF TRIC CCT WITH TARGET PROTEINS DURING BIOSYNTHESIS | Genes involved in Association of TriC/CCT with target proteins during biosynthesis |
0.5 | 1.5 | REACTOME DIGESTION OF DIETARY CARBOHYDRATE | Genes involved in Digestion of dietary carbohydrate |
0.1 | 1.5 | REACTOME CHONDROITIN SULFATE BIOSYNTHESIS | Genes involved in Chondroitin sulfate biosynthesis |
0.1 | 1.4 | REACTOME AMINE LIGAND BINDING RECEPTORS | Genes involved in Amine ligand-binding receptors |
0.1 | 1.3 | REACTOME SEROTONIN RECEPTORS | Genes involved in Serotonin receptors |
0.0 | 1.0 | REACTOME GAP JUNCTION ASSEMBLY | Genes involved in Gap junction assembly |
0.1 | 0.8 | REACTOME SEMA3A PLEXIN REPULSION SIGNALING BY INHIBITING INTEGRIN ADHESION | Genes involved in SEMA3A-Plexin repulsion signaling by inhibiting Integrin adhesion |