avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Nfil3 | mm10_v2_chr13_-_52981027_52981083 | 0.64 | 2.7e-05 | Click! |
Tef | mm10_v2_chr15_+_81811414_81811491 | -0.01 | 9.5e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr14_+_65970804 Show fit | 18.51 |
ENSMUST00000138191.1
|
clusterin |
|
chr14_+_65971049 Show fit | 18.27 |
ENSMUST00000128539.1
|
clusterin |
|
chr5_-_92328068 Show fit | 17.34 |
ENSMUST00000113093.3
|
chemokine (C-X-C motif) ligand 9 |
|
chr14_+_65971164 Show fit | 16.55 |
ENSMUST00000144619.1
|
clusterin |
|
chr14_+_65970610 Show fit | 14.82 |
ENSMUST00000127387.1
|
clusterin |
|
chr4_-_60582152 Show fit | 11.95 |
ENSMUST00000098047.2
|
major urinary protein 10 |
|
chr6_-_119467210 Show fit | 11.85 |
ENSMUST00000118120.1
|
wingless-related MMTV integration site 5B |
|
chr5_-_86926521 Show fit | 11.56 |
ENSMUST00000031183.2
|
UDP glucuronosyltransferase 2 family, polypeptide B1 |
|
chr8_-_93197799 Show fit | 11.50 |
ENSMUST00000034172.7
|
carboxylesterase 1D |
|
chr9_-_78347140 Show fit | 10.60 |
ENSMUST00000034902.5
|
glutathione S-transferase, alpha 2 (Yc2) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
11.4 | 68.2 | GO:1902998 | regulation of neuronal signal transduction(GO:1902847) positive regulation of neurofibrillary tangle assembly(GO:1902998) |
1.3 | 37.8 | GO:0035634 | response to stilbenoid(GO:0035634) |
0.6 | 17.3 | GO:1901741 | positive regulation of myoblast fusion(GO:1901741) |
0.3 | 13.4 | GO:0008333 | endosome to lysosome transport(GO:0008333) |
0.2 | 11.9 | GO:0045600 | positive regulation of fat cell differentiation(GO:0045600) |
3.9 | 11.6 | GO:0018879 | biphenyl metabolic process(GO:0018879) |
2.3 | 11.6 | GO:2000255 | negative regulation of male germ cell proliferation(GO:2000255) |
3.8 | 11.5 | GO:0019626 | short-chain fatty acid catabolic process(GO:0019626) |
1.2 | 11.2 | GO:0045919 | positive regulation of cytolysis(GO:0045919) |
0.4 | 11.1 | GO:0015721 | bile acid and bile salt transport(GO:0015721) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
5.2 | 68.2 | GO:0097418 | neurofibrillary tangle(GO:0097418) |
0.0 | 31.8 | GO:0070062 | extracellular exosome(GO:0070062) |
0.2 | 19.9 | GO:0005791 | rough endoplasmic reticulum(GO:0005791) |
0.1 | 14.4 | GO:0072562 | blood microparticle(GO:0072562) |
0.0 | 12.4 | GO:0005759 | mitochondrial matrix(GO:0005759) |
0.0 | 12.4 | GO:0009897 | external side of plasma membrane(GO:0009897) |
0.2 | 11.5 | GO:0005788 | endoplasmic reticulum lumen(GO:0005788) |
3.4 | 10.1 | GO:0032010 | phagolysosome(GO:0032010) |
0.0 | 9.9 | GO:0016323 | basolateral plasma membrane(GO:0016323) |
1.4 | 9.8 | GO:0070695 | FHF complex(GO:0070695) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.8 | 68.2 | GO:0051787 | misfolded protein binding(GO:0051787) |
1.0 | 29.4 | GO:1900750 | glutathione binding(GO:0043295) oligopeptide binding(GO:1900750) |
0.1 | 18.6 | GO:0052689 | carboxylic ester hydrolase activity(GO:0052689) |
0.1 | 18.3 | GO:0061630 | ubiquitin protein ligase activity(GO:0061630) |
3.5 | 17.3 | GO:0048248 | CXCR3 chemokine receptor binding(GO:0048248) |
0.0 | 15.3 | GO:0004674 | protein serine/threonine kinase activity(GO:0004674) |
0.4 | 14.0 | GO:0008392 | arachidonic acid epoxygenase activity(GO:0008392) |
0.3 | 12.6 | GO:0015020 | glucuronosyltransferase activity(GO:0015020) |
0.2 | 11.9 | GO:0005109 | frizzled binding(GO:0005109) |
2.9 | 11.6 | GO:0004667 | prostaglandin-D synthase activity(GO:0004667) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.8 | 68.2 | PID MYC REPRESS PATHWAY | Validated targets of C-MYC transcriptional repression |
0.3 | 17.7 | PID IL23 PATHWAY | IL23-mediated signaling events |
0.2 | 10.5 | PID TCR CALCIUM PATHWAY | Calcium signaling in the CD4+ TCR pathway |
0.1 | 7.1 | WNT SIGNALING | Genes related to Wnt-mediated signal transduction |
0.1 | 6.4 | PID SYNDECAN 1 PATHWAY | Syndecan-1-mediated signaling events |
0.0 | 6.1 | NABA SECRETED FACTORS | Genes encoding secreted soluble factors |
0.1 | 5.8 | PID RHOA PATHWAY | RhoA signaling pathway |
0.1 | 5.5 | PID LYSOPHOSPHOLIPID PATHWAY | LPA receptor mediated events |
0.1 | 5.2 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.0 | 3.4 | PID ERA GENOMIC PATHWAY | Validated nuclear estrogen receptor alpha network |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 78.4 | REACTOME RESPONSE TO ELEVATED PLATELET CYTOSOLIC CA2 | Genes involved in Response to elevated platelet cytosolic Ca2+ |
0.7 | 29.4 | REACTOME GLUTATHIONE CONJUGATION | Genes involved in Glutathione conjugation |
0.3 | 11.8 | REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES | Genes involved in Chemokine receptors bind chemokines |
1.3 | 11.4 | REACTOME RECYCLING OF BILE ACIDS AND SALTS | Genes involved in Recycling of bile acids and salts |
0.2 | 11.1 | REACTOME AMINO ACID AND OLIGOPEPTIDE SLC TRANSPORTERS | Genes involved in Amino acid and oligopeptide SLC transporters |
1.3 | 10.0 | REACTOME OPSINS | Genes involved in Opsins |
0.7 | 8.8 | REACTOME REGULATION OF COMPLEMENT CASCADE | Genes involved in Regulation of Complement cascade |
0.0 | 8.3 | REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION | Genes involved in Antigen processing: Ubiquitination & Proteasome degradation |
0.3 | 7.9 | REACTOME SULFUR AMINO ACID METABOLISM | Genes involved in Sulfur amino acid metabolism |
0.2 | 7.8 | REACTOME AMINE LIGAND BINDING RECEPTORS | Genes involved in Amine ligand-binding receptors |