avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Nhlh1 | mm10_v2_chr1_-_172057573_172057598 | -0.21 | 2.3e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr11_+_99864476 Show fit | 2.36 |
ENSMUST00000092694.3
|
predicted gene 11559 |
|
chr15_-_60921270 Show fit | 1.42 |
ENSMUST00000096418.3
|
alpha-1-B glycoprotein |
|
chr11_+_99857915 Show fit | 1.26 |
ENSMUST00000107434.1
|
predicted gene 11568 |
|
chr11_-_99851608 Show fit | 1.16 |
ENSMUST00000107437.1
|
keratin associated protein 4-16 |
|
chr9_+_54764748 Show fit | 1.10 |
ENSMUST00000034830.8
|
cellular retinoic acid binding protein I |
|
chr2_+_102658640 Show fit | 1.07 |
ENSMUST00000080210.3
|
solute carrier family 1 (glial high affinity glutamate transporter), member 2 |
|
chr14_-_37048957 Show fit | 1.06 |
ENSMUST00000022338.5
|
retinal G protein coupled receptor |
|
chr2_-_172940299 Show fit | 1.05 |
ENSMUST00000009143.7
|
bone morphogenetic protein 7 |
|
chr14_+_56887795 Show fit | 1.03 |
ENSMUST00000022511.8
|
zinc finger, MYM-type 2 |
|
chr8_+_45658666 Show fit | 0.99 |
ENSMUST00000134675.1
ENSMUST00000139869.1 ENSMUST00000126067.1 |
sorbin and SH3 domain containing 2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 1.6 | GO:0006663 | platelet activating factor biosynthetic process(GO:0006663) |
0.1 | 1.4 | GO:0009650 | UV protection(GO:0009650) |
0.1 | 1.4 | GO:1902083 | negative regulation of peptidyl-cysteine S-nitrosylation(GO:1902083) |
0.0 | 1.3 | GO:0008631 | intrinsic apoptotic signaling pathway in response to oxidative stress(GO:0008631) |
0.2 | 1.2 | GO:2000124 | regulation of endocannabinoid signaling pathway(GO:2000124) |
0.4 | 1.1 | GO:1900104 | hyaluranon cable assembly(GO:0036118) nephrogenic mesenchyme development(GO:0072076) regulation of hyaluranon cable assembly(GO:1900104) positive regulation of hyaluranon cable assembly(GO:1900106) |
0.3 | 1.1 | GO:1900739 | regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway(GO:1900739) positive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway(GO:1900740) |
0.3 | 1.1 | GO:0016103 | diterpenoid catabolic process(GO:0016103) retinoic acid catabolic process(GO:0034653) |
0.2 | 1.1 | GO:0070777 | D-aspartate transport(GO:0070777) D-aspartate import(GO:0070779) |
0.1 | 1.1 | GO:0018298 | protein-chromophore linkage(GO:0018298) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.8 | GO:0005758 | mitochondrial intermembrane space(GO:0005758) |
0.0 | 1.8 | GO:0042734 | presynaptic membrane(GO:0042734) |
0.0 | 1.4 | GO:0034451 | centriolar satellite(GO:0034451) |
0.0 | 1.2 | GO:0045095 | keratin filament(GO:0045095) |
0.0 | 1.0 | GO:0005882 | intermediate filament(GO:0005882) |
0.1 | 0.9 | GO:0005827 | polar microtubule(GO:0005827) |
0.1 | 0.9 | GO:0061689 | tricellular tight junction(GO:0061689) |
0.0 | 0.9 | GO:0005892 | acetylcholine-gated channel complex(GO:0005892) |
0.1 | 0.8 | GO:0070695 | FHF complex(GO:0070695) |
0.1 | 0.8 | GO:0044233 | ER-mitochondrion membrane contact site(GO:0044233) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.3 | GO:0061630 | ubiquitin protein ligase activity(GO:0061630) |
0.0 | 2.0 | GO:0071837 | HMG box domain binding(GO:0071837) |
0.3 | 1.6 | GO:0004142 | diacylglycerol cholinephosphotransferase activity(GO:0004142) |
0.1 | 1.3 | GO:0019841 | retinol binding(GO:0019841) |
0.0 | 1.3 | GO:0005112 | Notch binding(GO:0005112) |
0.0 | 1.3 | GO:0031624 | ubiquitin conjugating enzyme binding(GO:0031624) |
0.0 | 1.2 | GO:0003727 | single-stranded RNA binding(GO:0003727) |
0.3 | 1.1 | GO:0004096 | catalase activity(GO:0004096) |
0.2 | 1.1 | GO:0015501 | glutamate:sodium symporter activity(GO:0015501) |
0.1 | 1.1 | GO:0008020 | G-protein coupled photoreceptor activity(GO:0008020) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.6 | PID NOTCH PATHWAY | Notch signaling pathway |
0.0 | 1.4 | PID TAP63 PATHWAY | Validated transcriptional targets of TAp63 isoforms |
0.0 | 1.3 | ST PHOSPHOINOSITIDE 3 KINASE PATHWAY | PI3K Pathway |
0.0 | 1.3 | PID BETA CATENIN NUC PATHWAY | Regulation of nuclear beta catenin signaling and target gene transcription |
0.1 | 1.1 | PID ALK2 PATHWAY | ALK2 signaling events |
0.0 | 1.1 | PID DNA PK PATHWAY | DNA-PK pathway in nonhomologous end joining |
0.0 | 1.1 | NABA COLLAGENS | Genes encoding collagen proteins |
0.0 | 0.9 | PID NEPHRIN NEPH1 PATHWAY | Nephrin/Neph1 signaling in the kidney podocyte |
0.0 | 0.9 | PID FOXO PATHWAY | FoxO family signaling |
0.0 | 0.9 | PID HNF3A PATHWAY | FOXA1 transcription factor network |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.9 | REACTOME SYNTHESIS OF PC | Genes involved in Synthesis of PC |
0.0 | 1.3 | REACTOME HEPARAN SULFATE HEPARIN HS GAG METABOLISM | Genes involved in Heparan sulfate/heparin (HS-GAG) metabolism |
0.1 | 1.2 | REACTOME PURINE CATABOLISM | Genes involved in Purine catabolism |
0.0 | 1.2 | REACTOME RESPIRATORY ELECTRON TRANSPORT | Genes involved in Respiratory electron transport |
0.0 | 1.2 | REACTOME COLLAGEN FORMATION | Genes involved in Collagen formation |
0.0 | 1.2 | REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY | Genes involved in Nuclear Receptor transcription pathway |
0.1 | 1.1 | REACTOME OPSINS | Genes involved in Opsins |
0.0 | 1.1 | REACTOME SIGNALING BY FGFR1 FUSION MUTANTS | Genes involved in Signaling by FGFR1 fusion mutants |
0.1 | 1.0 | REACTOME SYNTHESIS OF BILE ACIDS AND BILE SALTS VIA 24 HYDROXYCHOLESTEROL | Genes involved in Synthesis of bile acids and bile salts via 24-hydroxycholesterol |
0.1 | 1.0 | REACTOME APOPTOTIC CLEAVAGE OF CELL ADHESION PROTEINS | Genes involved in Apoptotic cleavage of cell adhesion proteins |