avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Nkx1-1 | mm10_v2_chr5_-_33433976_33433976 | 0.23 | 1.8e-01 | Click! |
Nkx1-2 | mm10_v2_chr7_-_132599637_132599637 | 0.01 | 9.8e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr19_-_7966000 Show fit | 5.13 |
ENSMUST00000182102.1
ENSMUST00000075619.4 |
solute carrier family 22, member 27 |
|
chr1_-_150466165 Show fit | 2.17 |
ENSMUST00000162367.1
ENSMUST00000161611.1 ENSMUST00000161320.1 ENSMUST00000159035.1 |
proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein) |
|
chr10_+_127898515 Show fit | 0.93 |
ENSMUST00000047134.7
|
4short chain dehydrogenase/reductase family 9C, member 7 |
|
chr14_-_70429072 Show fit | 0.90 |
ENSMUST00000048129.4
|
piwi-like RNA-mediated gene silencing 2 |
|
chr5_+_90561102 Show fit | 0.85 |
ENSMUST00000094615.4
|
RIKEN cDNA 5830473C10 gene |
|
chr5_+_9100681 Show fit | 0.73 |
ENSMUST00000115365.1
|
transmembrane protein 243, mitochondrial |
|
chr11_+_43682038 Show fit | 0.62 |
ENSMUST00000094294.4
|
PWWP domain containing 2A |
|
chr7_-_73537621 Show fit | 0.55 |
ENSMUST00000172704.1
|
chromodomain helicase DNA binding protein 2 |
|
chr11_-_99244058 Show fit | 0.53 |
ENSMUST00000103132.3
ENSMUST00000038214.6 |
keratin 222 |
|
chr13_+_94083490 Show fit | 0.52 |
ENSMUST00000156071.1
|
lipoma HMGIC fusion partner-like 2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 5.1 | GO:0015747 | urate transport(GO:0015747) |
0.3 | 2.2 | GO:0045409 | negative regulation of interleukin-6 biosynthetic process(GO:0045409) |
0.3 | 0.9 | GO:0000239 | pachytene(GO:0000239) |
0.2 | 0.7 | GO:0019085 | early viral transcription(GO:0019085) |
0.2 | 0.7 | GO:0015825 | L-serine transport(GO:0015825) |
0.0 | 0.6 | GO:0060218 | hematopoietic stem cell differentiation(GO:0060218) |
0.1 | 0.5 | GO:0070562 | regulation of vitamin D receptor signaling pathway(GO:0070562) |
0.0 | 0.5 | GO:0072615 | interleukin-17 secretion(GO:0072615) |
0.0 | 0.5 | GO:1901898 | negative regulation of relaxation of cardiac muscle(GO:1901898) |
0.1 | 0.4 | GO:0031554 | regulation of DNA-templated transcription, termination(GO:0031554) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.2 | GO:0005882 | intermediate filament(GO:0005882) |
0.2 | 0.9 | GO:1990923 | PET complex(GO:1990923) |
0.0 | 0.8 | GO:0043034 | costamere(GO:0043034) |
0.0 | 0.7 | GO:0000930 | gamma-tubulin complex(GO:0000930) |
0.1 | 0.5 | GO:0005726 | perichromatin fibrils(GO:0005726) |
0.0 | 0.3 | GO:0042612 | MHC class I protein complex(GO:0042612) |
0.0 | 0.2 | GO:0097431 | mitotic spindle pole(GO:0097431) |
0.0 | 0.1 | GO:0030689 | Noc complex(GO:0030689) |
0.0 | 0.1 | GO:0033256 | I-kappaB/NF-kappaB complex(GO:0033256) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 5.1 | GO:0015143 | urate transmembrane transporter activity(GO:0015143) salt transmembrane transporter activity(GO:1901702) |
0.1 | 2.2 | GO:0030247 | pattern binding(GO:0001871) polysaccharide binding(GO:0030247) |
0.2 | 0.9 | GO:0034584 | piRNA binding(GO:0034584) |
0.0 | 0.9 | GO:0004745 | retinol dehydrogenase activity(GO:0004745) |
0.1 | 0.7 | GO:0022858 | L-alanine transmembrane transporter activity(GO:0015180) alanine transmembrane transporter activity(GO:0022858) |
0.1 | 0.5 | GO:0008142 | oxysterol binding(GO:0008142) |
0.1 | 0.5 | GO:0034056 | estrogen response element binding(GO:0034056) |
0.0 | 0.5 | GO:0004115 | 3',5'-cyclic-AMP phosphodiesterase activity(GO:0004115) |
0.0 | 0.4 | GO:1990226 | histone methyltransferase binding(GO:1990226) |
0.0 | 0.4 | GO:0015248 | sterol transporter activity(GO:0015248) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.1 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.0 | 0.4 | PID CIRCADIAN PATHWAY | Circadian rhythm pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.7 | REACTOME AMINO ACID TRANSPORT ACROSS THE PLASMA MEMBRANE | Genes involved in Amino acid transport across the plasma membrane |
0.0 | 0.5 | REACTOME SIGNALING BY FGFR1 FUSION MUTANTS | Genes involved in Signaling by FGFR1 fusion mutants |
0.0 | 0.3 | REACTOME GLUCURONIDATION | Genes involved in Glucuronidation |
0.0 | 0.3 | REACTOME CELL EXTRACELLULAR MATRIX INTERACTIONS | Genes involved in Cell-extracellular matrix interactions |