avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Nkx2-1 | mm10_v2_chr12_-_56536895_56536937 | 0.24 | 1.6e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr18_-_68429235 Show fit | 7.45 |
ENSMUST00000052347.6
|
melanocortin 2 receptor |
|
chr9_+_98490522 Show fit | 6.91 |
ENSMUST00000035029.2
|
retinol binding protein 2, cellular |
|
chr10_+_75568648 Show fit | 4.78 |
ENSMUST00000134503.1
ENSMUST00000125770.1 ENSMUST00000128886.1 ENSMUST00000151212.1 |
gamma-glutamyltransferase 1 |
|
chr10_+_75568630 Show fit | 4.34 |
ENSMUST00000145928.1
|
gamma-glutamyltransferase 1 |
|
chr10_+_75568641 Show fit | 4.20 |
ENSMUST00000131565.1
|
gamma-glutamyltransferase 1 |
|
chr15_+_66670749 Show fit | 3.48 |
ENSMUST00000065916.7
|
thyroglobulin |
|
chr14_-_47411666 Show fit | 3.47 |
ENSMUST00000111778.3
|
discs, large (Drosophila) homolog-associated protein 5 |
|
chr2_-_170406501 Show fit | 2.87 |
ENSMUST00000154650.1
|
breast carcinoma amplified sequence 1 |
|
chr11_+_117849223 Show fit | 2.67 |
ENSMUST00000081387.4
|
baculoviral IAP repeat-containing 5 |
|
chr8_-_111691002 Show fit | 2.64 |
ENSMUST00000034435.5
|
chymotrypsinogen B1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.7 | 13.3 | GO:1901750 | leukotriene D4 metabolic process(GO:1901748) leukotriene D4 biosynthetic process(GO:1901750) |
0.1 | 7.8 | GO:0030819 | positive regulation of cAMP biosynthetic process(GO:0030819) |
0.9 | 6.9 | GO:0006776 | vitamin A metabolic process(GO:0006776) |
0.8 | 4.7 | GO:0031536 | positive regulation of exit from mitosis(GO:0031536) |
0.1 | 3.7 | GO:0007585 | respiratory gaseous exchange(GO:0007585) |
0.3 | 3.5 | GO:0015705 | iodide transport(GO:0015705) |
0.3 | 3.4 | GO:2000381 | negative regulation of mesoderm development(GO:2000381) |
0.0 | 2.6 | GO:0007586 | digestion(GO:0007586) |
0.1 | 2.5 | GO:2000001 | regulation of DNA damage checkpoint(GO:2000001) |
0.2 | 2.4 | GO:0035898 | parathyroid hormone secretion(GO:0035898) calcium ion import across plasma membrane(GO:0098703) calcium ion import into cell(GO:1990035) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 22.1 | GO:0005615 | extracellular space(GO:0005615) |
0.0 | 5.3 | GO:0001650 | fibrillar center(GO:0001650) |
0.4 | 5.0 | GO:0097208 | alveolar lamellar body(GO:0097208) |
0.9 | 4.7 | GO:0031021 | interphase microtubule organizing center(GO:0031021) |
0.2 | 3.5 | GO:0031616 | spindle pole centrosome(GO:0031616) |
0.3 | 2.1 | GO:0005826 | actomyosin contractile ring(GO:0005826) |
0.1 | 2.1 | GO:0005652 | nuclear lamina(GO:0005652) |
0.0 | 1.8 | GO:1990391 | DNA repair complex(GO:1990391) |
0.3 | 1.7 | GO:0005853 | eukaryotic translation elongation factor 1 complex(GO:0005853) |
0.4 | 1.6 | GO:0014802 | terminal cisterna(GO:0014802) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.1 | 13.3 | GO:0036374 | glutathione hydrolase activity(GO:0036374) |
1.2 | 7.4 | GO:0004977 | melanocortin receptor activity(GO:0004977) |
0.5 | 6.9 | GO:0019841 | retinal binding(GO:0016918) retinol binding(GO:0019841) |
0.1 | 5.1 | GO:0008536 | Ran GTPase binding(GO:0008536) |
0.0 | 4.6 | GO:0001664 | G-protein coupled receptor binding(GO:0001664) |
0.0 | 3.5 | GO:0005179 | hormone activity(GO:0005179) |
0.0 | 3.2 | GO:0004721 | phosphoprotein phosphatase activity(GO:0004721) |
0.1 | 2.8 | GO:0003746 | translation elongation factor activity(GO:0003746) |
0.4 | 2.7 | GO:0061649 | ubiquitinated histone binding(GO:0061649) |
0.0 | 2.6 | GO:0070888 | E-box binding(GO:0070888) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 8.1 | PID AURORA A PATHWAY | Aurora A signaling |
0.1 | 6.1 | PID RB 1PATHWAY | Regulation of retinoblastoma protein |
0.0 | 4.8 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.0 | 2.4 | PID PTP1B PATHWAY | Signaling events mediated by PTP1B |
0.0 | 2.1 | PID CMYB PATHWAY | C-MYB transcription factor network |
0.1 | 1.8 | PID CIRCADIAN PATHWAY | Circadian rhythm pathway |
0.0 | 1.5 | ST MYOCYTE AD PATHWAY | Myocyte Adrenergic Pathway is a specific case of the generalized Adrenergic Pathway. |
0.0 | 1.5 | ST GRANULE CELL SURVIVAL PATHWAY | Granule Cell Survival Pathway is a specific case of more general PAC1 Receptor Pathway. |
0.0 | 1.5 | PID ARF6 TRAFFICKING PATHWAY | Arf6 trafficking events |
0.0 | 1.4 | ST WNT BETA CATENIN PATHWAY | Wnt/beta-catenin Pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 13.3 | REACTOME GLUTATHIONE CONJUGATION | Genes involved in Glutathione conjugation |
0.1 | 11.0 | REACTOME PEPTIDE LIGAND BINDING RECEPTORS | Genes involved in Peptide ligand-binding receptors |
0.2 | 6.9 | REACTOME METABOLISM OF STEROID HORMONES AND VITAMINS A AND D | Genes involved in Metabolism of steroid hormones and vitamins A and D |
0.0 | 4.7 | REACTOME MITOTIC PROMETAPHASE | Genes involved in Mitotic Prometaphase |
0.0 | 3.9 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.1 | 3.4 | REACTOME RECYCLING PATHWAY OF L1 | Genes involved in Recycling pathway of L1 |
0.0 | 2.8 | REACTOME TRANSLATION | Genes involved in Translation |
0.1 | 2.6 | REACTOME DEGRADATION OF THE EXTRACELLULAR MATRIX | Genes involved in Degradation of the extracellular matrix |
0.2 | 2.1 | REACTOME THE NLRP3 INFLAMMASOME | Genes involved in The NLRP3 inflammasome |
0.0 | 1.8 | REACTOME BMAL1 CLOCK NPAS2 ACTIVATES CIRCADIAN EXPRESSION | Genes involved in BMAL1:CLOCK/NPAS2 Activates Circadian Expression |