avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Nkx2-3 | mm10_v2_chr19_+_43612299_43612325 | 0.32 | 5.4e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr5_-_62765618 Show fit | 2.47 |
ENSMUST00000159470.1
|
ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 |
|
chr14_-_20269162 Show fit | 2.30 |
ENSMUST00000024155.7
|
potassium channel, subfamily K, member 16 |
|
chr13_+_19342154 Show fit | 2.19 |
ENSMUST00000103566.3
|
T cell receptor gamma, constant 4 |
|
chr15_-_79285502 Show fit | 1.98 |
ENSMUST00000165408.1
|
BAI1-associated protein 2-like 2 |
|
chr12_+_38783455 Show fit | 1.67 |
ENSMUST00000161980.1
ENSMUST00000160701.1 |
ets variant gene 1 |
|
chr3_-_75270073 Show fit | 1.57 |
ENSMUST00000039047.4
|
serine (or cysteine) peptidase inhibitor, clade I, member 2 |
|
chr11_+_67171095 Show fit | 1.51 |
ENSMUST00000018641.7
|
myosin, heavy polypeptide 2, skeletal muscle, adult |
|
chr7_-_119459266 Show fit | 1.51 |
ENSMUST00000033255.5
|
glycoprotein 2 (zymogen granule membrane) |
|
chr11_+_67171027 Show fit | 1.50 |
ENSMUST00000170159.1
|
myosin, heavy polypeptide 2, skeletal muscle, adult |
|
chr15_-_79285470 Show fit | 1.48 |
ENSMUST00000170955.1
|
BAI1-associated protein 2-like 2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 3.7 | GO:0048935 | peripheral nervous system neuron differentiation(GO:0048934) peripheral nervous system neuron development(GO:0048935) |
0.2 | 3.5 | GO:2000251 | positive regulation of actin cytoskeleton reorganization(GO:2000251) |
0.2 | 3.0 | GO:0001778 | plasma membrane repair(GO:0001778) |
0.2 | 2.3 | GO:0030322 | stabilization of membrane potential(GO:0030322) |
0.3 | 1.5 | GO:0002386 | immune response in mucosal-associated lymphoid tissue(GO:0002386) |
0.0 | 1.4 | GO:0035855 | megakaryocyte development(GO:0035855) |
0.0 | 1.3 | GO:0015701 | bicarbonate transport(GO:0015701) |
0.4 | 1.1 | GO:0030221 | basophil differentiation(GO:0030221) |
0.1 | 1.1 | GO:0042118 | endothelial cell activation(GO:0042118) |
0.3 | 1.0 | GO:1905000 | regulation of membrane repolarization during atrial cardiac muscle cell action potential(GO:1905000) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.6 | GO:0016323 | basolateral plasma membrane(GO:0016323) |
0.3 | 3.5 | GO:0071439 | clathrin complex(GO:0071439) |
0.4 | 3.0 | GO:0005826 | actomyosin contractile ring(GO:0005826) |
0.1 | 2.4 | GO:0005859 | muscle myosin complex(GO:0005859) |
0.2 | 1.5 | GO:0005927 | muscle tendon junction(GO:0005927) |
0.0 | 1.3 | GO:0043034 | costamere(GO:0043034) |
0.3 | 1.0 | GO:0031523 | Myb complex(GO:0031523) |
0.0 | 1.0 | GO:0030673 | axolemma(GO:0030673) |
0.2 | 0.8 | GO:1990923 | PET complex(GO:1990923) |
0.0 | 0.8 | GO:0031519 | PcG protein complex(GO:0031519) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 2.3 | GO:0022841 | potassium ion leak channel activity(GO:0022841) |
0.0 | 2.3 | GO:0004867 | serine-type endopeptidase inhibitor activity(GO:0004867) |
0.0 | 1.9 | GO:0005547 | phosphatidylinositol-3,4,5-trisphosphate binding(GO:0005547) |
0.0 | 1.5 | GO:0003823 | antigen binding(GO:0003823) |
0.1 | 1.3 | GO:0005436 | sodium:phosphate symporter activity(GO:0005436) |
0.1 | 1.3 | GO:0008510 | sodium:bicarbonate symporter activity(GO:0008510) |
0.2 | 1.1 | GO:0005499 | vitamin D binding(GO:0005499) |
0.1 | 1.1 | GO:0047498 | calcium-dependent phospholipase A2 activity(GO:0047498) |
0.1 | 1.1 | GO:0008301 | DNA binding, bending(GO:0008301) |
0.2 | 1.0 | GO:0034988 | Fc-gamma receptor I complex binding(GO:0034988) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.0 | SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES | Genes related to regulation of the actin cytoskeleton |
0.1 | 3.9 | PID P38 MK2 PATHWAY | p38 signaling mediated by MAPKAP kinases |
0.1 | 3.6 | PID ARF6 PATHWAY | Arf6 signaling events |
0.0 | 2.6 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.0 | 1.9 | PID AR PATHWAY | Coregulation of Androgen receptor activity |
0.0 | 1.2 | PID SYNDECAN 1 PATHWAY | Syndecan-1-mediated signaling events |
0.0 | 1.1 | PID GLYPICAN 1PATHWAY | Glypican 1 network |
0.0 | 1.1 | PID HES HEY PATHWAY | Notch-mediated HES/HEY network |
0.0 | 1.0 | PID IL23 PATHWAY | IL23-mediated signaling events |
0.0 | 0.9 | PID RHOA REG PATHWAY | Regulation of RhoA activity |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.4 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.2 | 2.3 | REACTOME TANDEM PORE DOMAIN POTASSIUM CHANNELS | Genes involved in Tandem pore domain potassium channels |
0.0 | 2.1 | REACTOME TRANSPORT OF INORGANIC CATIONS ANIONS AND AMINO ACIDS OLIGOPEPTIDES | Genes involved in Transport of inorganic cations/anions and amino acids/oligopeptides |
0.0 | 1.6 | REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY | Genes involved in Nuclear Receptor transcription pathway |
0.0 | 1.2 | REACTOME COLLAGEN FORMATION | Genes involved in Collagen formation |
0.0 | 1.0 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.0 | 0.8 | REACTOME PURINE SALVAGE | Genes involved in Purine salvage |
0.0 | 0.7 | REACTOME SIGNALING BY FGFR3 MUTANTS | Genes involved in Signaling by FGFR3 mutants |
0.0 | 0.7 | REACTOME CYCLIN A B1 ASSOCIATED EVENTS DURING G2 M TRANSITION | Genes involved in Cyclin A/B1 associated events during G2/M transition |
0.0 | 0.7 | REACTOME METABOLISM OF STEROID HORMONES AND VITAMINS A AND D | Genes involved in Metabolism of steroid hormones and vitamins A and D |