avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Nkx2-4 | mm10_v2_chr2_-_147085445_147085483 | 0.31 | 6.4e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr6_+_41354105 Show fit | 4.00 |
ENSMUST00000072103.5
|
trypsin 10 |
|
chr3_-_92588982 Show fit | 3.76 |
ENSMUST00000098888.5
|
sperm mitochondria-associated cysteine-rich protein |
|
chr6_-_122609964 Show fit | 1.48 |
ENSMUST00000032211.4
|
growth differentiation factor 3 |
|
chr2_+_131950855 Show fit | 1.21 |
ENSMUST00000110170.1
ENSMUST00000110172.2 ENSMUST00000110171.2 |
prion protein dublet |
|
chr13_+_108316395 Show fit | 1.16 |
ENSMUST00000171178.1
|
DEP domain containing 1B |
|
chr14_-_47418407 Show fit | 1.15 |
ENSMUST00000043296.3
|
discs, large (Drosophila) homolog-associated protein 5 |
|
chr19_-_39886730 Show fit | 1.14 |
ENSMUST00000168838.1
|
cytochrome P450, family 2, subfamily c, polypeptide 69 |
|
chr7_-_81566939 Show fit | 1.13 |
ENSMUST00000042318.5
|
fibronectin type III and SPRY domain containing 2 |
|
chr17_-_57194170 Show fit | 1.13 |
ENSMUST00000005976.6
|
tumor necrosis factor (ligand) superfamily, member 14 |
|
chr3_+_153844209 Show fit | 1.11 |
ENSMUST00000044089.3
|
ankyrin repeat and SOCS box-containing 17 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.0 | GO:0007586 | digestion(GO:0007586) |
0.5 | 3.8 | GO:0007341 | penetration of zona pellucida(GO:0007341) |
0.1 | 2.0 | GO:0097320 | membrane tubulation(GO:0097320) |
0.1 | 1.9 | GO:0019373 | epoxygenase P450 pathway(GO:0019373) |
0.0 | 1.9 | GO:0030177 | positive regulation of Wnt signaling pathway(GO:0030177) |
0.1 | 1.5 | GO:0048859 | formation of anatomical boundary(GO:0048859) |
0.1 | 1.2 | GO:0006878 | cellular copper ion homeostasis(GO:0006878) |
0.4 | 1.1 | GO:0008588 | release of cytoplasmic sequestered NF-kappaB(GO:0008588) |
0.0 | 1.1 | GO:0015701 | bicarbonate transport(GO:0015701) |
0.0 | 1.0 | GO:0000266 | mitochondrial fission(GO:0000266) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.0 | GO:0072562 | blood microparticle(GO:0072562) |
0.0 | 3.3 | GO:0005741 | mitochondrial outer membrane(GO:0005741) |
0.1 | 3.2 | GO:0002102 | podosome(GO:0002102) |
0.0 | 1.3 | GO:0016605 | PML body(GO:0016605) |
0.1 | 1.1 | GO:0031616 | spindle pole centrosome(GO:0031616) |
0.0 | 0.9 | GO:0019005 | SCF ubiquitin ligase complex(GO:0019005) |
0.0 | 0.7 | GO:0002080 | acrosomal membrane(GO:0002080) |
0.0 | 0.4 | GO:0044224 | juxtaparanode region of axon(GO:0044224) |
0.0 | 0.3 | GO:0005639 | integral component of nuclear inner membrane(GO:0005639) intrinsic component of nuclear inner membrane(GO:0031229) |
0.0 | 0.1 | GO:0044299 | C-fiber(GO:0044299) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.0 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.1 | 1.9 | GO:0008392 | arachidonic acid epoxygenase activity(GO:0008392) |
0.0 | 1.5 | GO:0005160 | transforming growth factor beta receptor binding(GO:0005160) |
0.0 | 1.2 | GO:0005507 | copper ion binding(GO:0005507) |
0.1 | 1.1 | GO:0008510 | sodium:bicarbonate symporter activity(GO:0008510) |
0.0 | 1.1 | GO:0005164 | tumor necrosis factor receptor binding(GO:0005164) |
0.0 | 0.8 | GO:0030676 | Rac guanyl-nucleotide exchange factor activity(GO:0030676) |
0.0 | 0.6 | GO:0042043 | neurexin family protein binding(GO:0042043) |
0.0 | 0.6 | GO:0005242 | inward rectifier potassium channel activity(GO:0005242) |
0.1 | 0.5 | GO:0003938 | IMP dehydrogenase activity(GO:0003938) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.4 | PID RHOA REG PATHWAY | Regulation of RhoA activity |
0.0 | 1.1 | PID AURORA A PATHWAY | Aurora A signaling |
0.0 | 0.5 | ST STAT3 PATHWAY | STAT3 Pathway |
0.0 | 0.5 | PID CIRCADIAN PATHWAY | Circadian rhythm pathway |
0.0 | 0.4 | PID TOLL ENDOGENOUS PATHWAY | Endogenous TLR signaling |
0.0 | 0.4 | ST GA12 PATHWAY | G alpha 12 Pathway |
0.0 | 0.4 | PID INTEGRIN2 PATHWAY | Beta2 integrin cell surface interactions |
0.0 | 0.3 | PID HEDGEHOG 2PATHWAY | Signaling events mediated by the Hedgehog family |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.5 | REACTOME INTERFERON GAMMA SIGNALING | Genes involved in Interferon gamma signaling |
0.0 | 1.4 | REACTOME NRAGE SIGNALS DEATH THROUGH JNK | Genes involved in NRAGE signals death through JNK |
0.0 | 0.9 | REACTOME INHIBITION OF VOLTAGE GATED CA2 CHANNELS VIA GBETA GAMMA SUBUNITS | Genes involved in Inhibition of voltage gated Ca2+ channels via Gbeta/gamma subunits |
0.0 | 0.5 | REACTOME PURINE RIBONUCLEOSIDE MONOPHOSPHATE BIOSYNTHESIS | Genes involved in Purine ribonucleoside monophosphate biosynthesis |
0.0 | 0.5 | REACTOME P2Y RECEPTORS | Genes involved in P2Y receptors |
0.0 | 0.5 | REACTOME DOWNREGULATION OF SMAD2 3 SMAD4 TRANSCRIPTIONAL ACTIVITY | Genes involved in Downregulation of SMAD2/3:SMAD4 transcriptional activity |
0.0 | 0.5 | REACTOME MYOGENESIS | Genes involved in Myogenesis |
0.1 | 0.4 | REACTOME BETA DEFENSINS | Genes involved in Beta defensins |
0.0 | 0.4 | REACTOME PECAM1 INTERACTIONS | Genes involved in PECAM1 interactions |
0.0 | 0.4 | REACTOME DARPP 32 EVENTS | Genes involved in DARPP-32 events |