avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Nkx2-5 | mm10_v2_chr17_-_26841565_26841591 | 0.36 | 3.3e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr6_+_30639218 Show fit | 19.30 |
ENSMUST00000031806.9
|
carboxypeptidase A1, pancreatic |
|
chr6_+_41521782 Show fit | 18.69 |
ENSMUST00000070380.4
|
protease, serine, 2 |
|
chr6_+_41302265 Show fit | 16.90 |
ENSMUST00000031913.4
|
trypsin 4 |
|
chr6_+_30541582 Show fit | 11.26 |
ENSMUST00000096066.4
|
carboxypeptidase A2, pancreatic |
|
chr4_-_137409777 Show fit | 9.93 |
ENSMUST00000024200.6
|
predicted gene 13011 |
|
chr4_-_141846277 Show fit | 8.43 |
ENSMUST00000105781.1
|
chymotrypsin C (caldecrin) |
|
chr6_-_136922169 Show fit | 5.89 |
ENSMUST00000032343.6
|
endoplasmic reticulum protein 27 |
|
chr4_-_4138432 Show fit | 4.05 |
ENSMUST00000070375.7
|
preproenkephalin |
|
chr14_+_80000292 Show fit | 3.06 |
ENSMUST00000088735.3
|
olfactomedin 4 |
|
chr17_+_47726834 Show fit | 2.92 |
ENSMUST00000024782.5
ENSMUST00000144955.1 |
progastricsin (pepsinogen C) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 36.0 | GO:0006508 | proteolysis(GO:0006508) |
1.2 | 18.7 | GO:0031000 | response to caffeine(GO:0031000) |
0.1 | 17.1 | GO:0007586 | digestion(GO:0007586) |
0.7 | 4.0 | GO:2000987 | positive regulation of fear response(GO:1903367) positive regulation of behavioral fear response(GO:2000987) |
0.1 | 3.1 | GO:1900026 | positive regulation of substrate adhesion-dependent cell spreading(GO:1900026) |
0.6 | 2.9 | GO:0002803 | positive regulation of antimicrobial peptide production(GO:0002225) positive regulation of antimicrobial humoral response(GO:0002760) positive regulation of antibacterial peptide production(GO:0002803) |
0.0 | 2.9 | GO:0007585 | respiratory gaseous exchange(GO:0007585) |
0.1 | 1.3 | GO:0035878 | nail development(GO:0035878) |
0.1 | 1.1 | GO:0008228 | opsonization(GO:0008228) |
0.1 | 1.1 | GO:2000810 | regulation of bicellular tight junction assembly(GO:2000810) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 69.2 | GO:0005615 | extracellular space(GO:0005615) |
1.0 | 4.0 | GO:0032280 | symmetric synapse(GO:0032280) |
0.2 | 2.9 | GO:0097208 | alveolar lamellar body(GO:0097208) |
0.2 | 2.9 | GO:0042581 | specific granule(GO:0042581) |
0.1 | 1.3 | GO:0030056 | hemidesmosome(GO:0030056) |
0.1 | 1.0 | GO:0005826 | actomyosin contractile ring(GO:0005826) |
0.0 | 0.9 | GO:0035371 | microtubule plus-end(GO:0035371) |
0.0 | 0.7 | GO:0034366 | spherical high-density lipoprotein particle(GO:0034366) |
0.0 | 0.6 | GO:0005891 | voltage-gated calcium channel complex(GO:0005891) |
0.0 | 0.5 | GO:0030127 | COPII vesicle coat(GO:0030127) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 43.2 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
1.0 | 30.6 | GO:0004181 | metallocarboxypeptidase activity(GO:0004181) |
0.6 | 4.0 | GO:0001515 | opioid peptide activity(GO:0001515) |
0.1 | 2.9 | GO:0004190 | aspartic-type endopeptidase activity(GO:0004190) |
0.2 | 1.3 | GO:0038132 | neuregulin binding(GO:0038132) |
0.2 | 1.1 | GO:0038181 | bile acid receptor activity(GO:0038181) |
0.2 | 0.8 | GO:0015057 | thrombin receptor activity(GO:0015057) |
0.0 | 0.8 | GO:0038191 | neuropilin binding(GO:0038191) |
0.2 | 0.7 | GO:0004063 | aryldialkylphosphatase activity(GO:0004063) |
0.0 | 0.7 | GO:0005109 | frizzled binding(GO:0005109) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 18.7 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.2 | 8.2 | PID UPA UPAR PATHWAY | Urokinase-type plasminogen activator (uPA) and uPAR-mediated signaling |
0.0 | 3.7 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.0 | 3.5 | PID AP1 PATHWAY | AP-1 transcription factor network |
0.1 | 1.3 | PID INTEGRIN4 PATHWAY | Alpha6 beta4 integrin-ligand interactions |
0.0 | 1.1 | PID TOLL ENDOGENOUS PATHWAY | Endogenous TLR signaling |
0.0 | 1.0 | PID INTEGRIN A4B1 PATHWAY | Alpha4 beta1 integrin signaling events |
0.0 | 0.8 | PID THROMBIN PAR4 PATHWAY | PAR4-mediated thrombin signaling events |
0.0 | 0.5 | PID HDAC CLASSIII PATHWAY | Signaling events mediated by HDAC Class III |
0.0 | 0.5 | PID WNT SIGNALING PATHWAY | Wnt signaling network |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.7 | 18.7 | REACTOME DEFENSINS | Genes involved in Defensins |
0.0 | 5.9 | REACTOME PEPTIDE LIGAND BINDING RECEPTORS | Genes involved in Peptide ligand-binding receptors |
0.0 | 1.3 | REACTOME INTEGRIN CELL SURFACE INTERACTIONS | Genes involved in Integrin cell surface interactions |
0.0 | 1.2 | REACTOME CLASS B 2 SECRETIN FAMILY RECEPTORS | Genes involved in Class B/2 (Secretin family receptors) |
0.0 | 1.1 | REACTOME G ALPHA S SIGNALLING EVENTS | Genes involved in G alpha (s) signalling events |
0.0 | 0.8 | REACTOME OTHER SEMAPHORIN INTERACTIONS | Genes involved in Other semaphorin interactions |
0.0 | 0.8 | REACTOME ACYL CHAIN REMODELLING OF PE | Genes involved in Acyl chain remodelling of PE |
0.0 | 0.6 | REACTOME PASSIVE TRANSPORT BY AQUAPORINS | Genes involved in Passive Transport by Aquaporins |
0.0 | 0.6 | REACTOME NCAM1 INTERACTIONS | Genes involved in NCAM1 interactions |
0.0 | 0.5 | REACTOME ANTIGEN PRESENTATION FOLDING ASSEMBLY AND PEPTIDE LOADING OF CLASS I MHC | Genes involved in Antigen Presentation: Folding, assembly and peptide loading of class I MHC |