avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Nkx2-9 | mm10_v2_chr12_-_56613270_56613291 | 0.02 | 9.1e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr9_+_98490522 Show fit | 4.87 |
ENSMUST00000035029.2
|
retinol binding protein 2, cellular |
|
chr6_-_40999479 Show fit | 4.32 |
ENSMUST00000166306.1
|
predicted gene 2663 |
|
chr6_+_41354105 Show fit | 3.90 |
ENSMUST00000072103.5
|
trypsin 10 |
|
chr6_+_78370877 Show fit | 3.55 |
ENSMUST00000096904.3
|
regenerating islet-derived 3 beta |
|
chr7_-_142576492 Show fit | 3.51 |
ENSMUST00000140716.1
|
H19 fetal liver mRNA |
|
chr4_-_119189949 Show fit | 3.47 |
ENSMUST00000124626.1
|
erythroblast membrane-associated protein |
|
chr2_+_173022360 Show fit | 3.00 |
ENSMUST00000173997.1
|
RNA binding motif protein 38 |
|
chr6_-_78378851 Show fit | 2.83 |
ENSMUST00000089667.1
ENSMUST00000167492.1 |
regenerating islet-derived 3 delta |
|
chr4_-_119190005 Show fit | 2.16 |
ENSMUST00000138395.1
ENSMUST00000156746.1 |
erythroblast membrane-associated protein |
|
chr6_+_145121727 Show fit | 1.92 |
ENSMUST00000032396.6
|
lymphoid-restricted membrane protein |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 4.9 | GO:0006776 | vitamin A metabolic process(GO:0006776) |
0.4 | 3.5 | GO:0036476 | neuron death in response to hydrogen peroxide(GO:0036476) regulation of hydrogen peroxide-induced neuron death(GO:1903207) negative regulation of hydrogen peroxide-induced neuron death(GO:1903208) |
0.3 | 3.5 | GO:2000653 | regulation of genetic imprinting(GO:2000653) |
0.0 | 3.4 | GO:0007586 | digestion(GO:0007586) |
0.2 | 3.0 | GO:0006977 | DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest(GO:0006977) |
0.4 | 2.4 | GO:0031536 | positive regulation of exit from mitosis(GO:0031536) |
0.2 | 2.3 | GO:0010838 | positive regulation of keratinocyte proliferation(GO:0010838) negative regulation of keratinocyte differentiation(GO:0045617) |
0.1 | 1.6 | GO:0046884 | follicle-stimulating hormone secretion(GO:0046884) |
0.1 | 1.6 | GO:0097067 | cellular response to thyroid hormone stimulus(GO:0097067) |
0.1 | 1.6 | GO:2000251 | positive regulation of actin cytoskeleton reorganization(GO:2000251) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.0 | GO:0005844 | polysome(GO:0005844) |
0.0 | 3.9 | GO:0072562 | blood microparticle(GO:0072562) |
0.1 | 3.5 | GO:0042588 | zymogen granule(GO:0042588) |
0.5 | 2.4 | GO:0031021 | interphase microtubule organizing center(GO:0031021) |
0.1 | 1.6 | GO:0071439 | clathrin complex(GO:0071439) |
0.1 | 1.4 | GO:0042571 | immunoglobulin complex, circulating(GO:0042571) |
0.1 | 1.4 | GO:0044217 | other organism(GO:0044215) other organism cell(GO:0044216) other organism part(GO:0044217) |
0.2 | 1.3 | GO:0000172 | ribonuclease MRP complex(GO:0000172) |
0.1 | 1.1 | GO:0005652 | nuclear lamina(GO:0005652) |
0.0 | 1.0 | GO:0005811 | lipid particle(GO:0005811) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 8.2 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.3 | 4.9 | GO:0016918 | retinal binding(GO:0016918) retinol binding(GO:0019841) |
0.0 | 3.5 | GO:0019838 | growth factor binding(GO:0019838) |
0.0 | 3.0 | GO:0003730 | mRNA 3'-UTR binding(GO:0003730) |
0.1 | 2.4 | GO:0008536 | Ran GTPase binding(GO:0008536) |
0.0 | 1.7 | GO:0070888 | E-box binding(GO:0070888) |
0.0 | 1.6 | GO:0051059 | NF-kappaB binding(GO:0051059) |
0.0 | 1.5 | GO:0005179 | hormone activity(GO:0005179) |
0.2 | 1.4 | GO:0034711 | inhibin binding(GO:0034711) |
0.1 | 1.4 | GO:0042834 | peptidoglycan binding(GO:0042834) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.9 | PID RB 1PATHWAY | Regulation of retinoblastoma protein |
0.1 | 2.4 | PID AURORA A PATHWAY | Aurora A signaling |
0.0 | 2.3 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.0 | 1.3 | PID REG GR PATHWAY | Glucocorticoid receptor regulatory network |
0.0 | 0.5 | ST GRANULE CELL SURVIVAL PATHWAY | Granule Cell Survival Pathway is a specific case of more general PAC1 Receptor Pathway. |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.9 | REACTOME METABOLISM OF STEROID HORMONES AND VITAMINS A AND D | Genes involved in Metabolism of steroid hormones and vitamins A and D |
0.0 | 2.6 | REACTOME MITOTIC PROMETAPHASE | Genes involved in Mitotic Prometaphase |
0.2 | 1.6 | REACTOME HORMONE LIGAND BINDING RECEPTORS | Genes involved in Hormone ligand-binding receptors |
0.0 | 1.3 | REACTOME RESPONSE TO ELEVATED PLATELET CYTOSOLIC CA2 | Genes involved in Response to elevated platelet cytosolic Ca2+ |
0.0 | 0.9 | REACTOME ACYL CHAIN REMODELLING OF PS | Genes involved in Acyl chain remodelling of PS |
0.0 | 0.9 | REACTOME REGULATION OF GLUCOKINASE BY GLUCOKINASE REGULATORY PROTEIN | Genes involved in Regulation of Glucokinase by Glucokinase Regulatory Protein |
0.0 | 0.7 | REACTOME SIGNAL ATTENUATION | Genes involved in Signal attenuation |
0.0 | 0.7 | REACTOME PYRUVATE METABOLISM | Genes involved in Pyruvate metabolism |
0.0 | 0.7 | REACTOME CHOLESTEROL BIOSYNTHESIS | Genes involved in Cholesterol biosynthesis |
0.0 | 0.5 | REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES | Genes involved in Chemokine receptors bind chemokines |