avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Nkx3-1 | mm10_v2_chr14_+_69190638_69190691 | 0.24 | 1.6e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr19_+_58759700 Show fit | 36.56 |
ENSMUST00000026081.3
|
pancreatic lipase-related protein 2 |
|
chr4_-_137430517 Show fit | 34.02 |
ENSMUST00000102522.4
|
chymotrypsin-like elastase family, member 3B |
|
chr6_+_78425973 Show fit | 28.66 |
ENSMUST00000079926.5
|
regenerating islet-derived 1 |
|
chr4_-_137409777 Show fit | 27.21 |
ENSMUST00000024200.6
|
predicted gene 13011 |
|
chr6_-_41035501 Show fit | 23.53 |
ENSMUST00000031931.5
|
RIKEN cDNA 2210010C04 gene |
|
chr3_-_113324052 Show fit | 21.76 |
ENSMUST00000179314.1
|
amylase 2a3 |
|
chr3_-_113258837 Show fit | 19.26 |
ENSMUST00000098673.3
|
amylase 2a5 |
|
chr3_-_113291449 Show fit | 18.13 |
ENSMUST00000179568.1
|
amylase 2a4 |
|
chr3_-_113532288 Show fit | 16.52 |
ENSMUST00000132353.1
|
amylase 2a1 |
|
chr3_-_113356658 Show fit | 15.91 |
ENSMUST00000098667.3
|
amylase 2a2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.2 | 36.6 | GO:0019377 | galactolipid metabolic process(GO:0019374) glycolipid catabolic process(GO:0019377) |
0.2 | 29.9 | GO:0008203 | cholesterol metabolic process(GO:0008203) |
1.9 | 28.7 | GO:0061469 | regulation of type B pancreatic cell proliferation(GO:0061469) |
0.0 | 19.7 | GO:0055114 | oxidation-reduction process(GO:0055114) |
0.0 | 6.6 | GO:0002377 | immunoglobulin production(GO:0002377) |
0.1 | 5.0 | GO:0002021 | response to dietary excess(GO:0002021) |
0.7 | 3.6 | GO:0018101 | protein citrullination(GO:0018101) histone citrullination(GO:0036414) |
0.6 | 3.0 | GO:0097167 | circadian regulation of translation(GO:0097167) |
0.1 | 2.7 | GO:0050901 | leukocyte tethering or rolling(GO:0050901) |
0.3 | 2.5 | GO:0036371 | protein localization to M-band(GO:0036309) protein localization to T-tubule(GO:0036371) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 78.2 | GO:0005615 | extracellular space(GO:0005615) |
0.0 | 44.0 | GO:0070062 | extracellular exosome(GO:0070062) |
2.4 | 36.6 | GO:0042589 | zymogen granule membrane(GO:0042589) |
1.9 | 28.7 | GO:0042588 | zymogen granule(GO:0042588) |
0.0 | 17.9 | GO:0005789 | endoplasmic reticulum membrane(GO:0005789) |
0.1 | 12.2 | GO:0072562 | blood microparticle(GO:0072562) |
0.0 | 3.6 | GO:0009897 | external side of plasma membrane(GO:0009897) |
0.0 | 2.6 | GO:0031225 | anchored component of membrane(GO:0031225) |
0.1 | 2.5 | GO:0031430 | M band(GO:0031430) |
0.6 | 2.3 | GO:0099522 | region of cytosol(GO:0099522) postsynaptic cytosol(GO:0099524) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
10.7 | 75.1 | GO:0004556 | alpha-amylase activity(GO:0004556) |
0.3 | 55.2 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
2.4 | 36.6 | GO:0047372 | acylglycerol lipase activity(GO:0047372) |
0.2 | 28.7 | GO:0008083 | growth factor activity(GO:0008083) |
2.9 | 22.9 | GO:0050649 | testosterone 6-beta-hydroxylase activity(GO:0050649) |
1.3 | 8.0 | GO:0018685 | alkane 1-monooxygenase activity(GO:0018685) |
0.1 | 4.8 | GO:0030507 | spectrin binding(GO:0030507) |
0.7 | 3.6 | GO:0004668 | protein-arginine deiminase activity(GO:0004668) |
0.1 | 3.0 | GO:0070888 | E-box binding(GO:0070888) |
0.1 | 2.5 | GO:0004709 | MAP kinase kinase kinase activity(GO:0004709) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 34.9 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.2 | 12.4 | SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES | Genes related to regulation of the actin cytoskeleton |
0.0 | 4.4 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.2 | 3.0 | PID CIRCADIAN PATHWAY | Circadian rhythm pathway |
0.1 | 2.3 | ST WNT CA2 CYCLIC GMP PATHWAY | Wnt/Ca2+/cyclic GMP signaling. |
0.0 | 2.3 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.0 | 1.8 | PID NCADHERIN PATHWAY | N-cadherin signaling events |
0.0 | 0.9 | PID RAC1 PATHWAY | RAC1 signaling pathway |
0.0 | 0.8 | PID ENDOTHELIN PATHWAY | Endothelins |
0.0 | 0.2 | PID S1P S1P3 PATHWAY | S1P3 pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 35.2 | REACTOME LIPID DIGESTION MOBILIZATION AND TRANSPORT | Genes involved in Lipid digestion, mobilization, and transport |
0.3 | 12.5 | REACTOME SMOOTH MUSCLE CONTRACTION | Genes involved in Smooth Muscle Contraction |
0.1 | 3.0 | REACTOME BMAL1 CLOCK NPAS2 ACTIVATES CIRCADIAN EXPRESSION | Genes involved in BMAL1:CLOCK/NPAS2 Activates Circadian Expression |
0.1 | 2.7 | REACTOME TERMINATION OF O GLYCAN BIOSYNTHESIS | Genes involved in Termination of O-glycan biosynthesis |
0.1 | 2.3 | REACTOME CREB PHOSPHORYLATION THROUGH THE ACTIVATION OF CAMKII | Genes involved in CREB phosphorylation through the activation of CaMKII |
0.1 | 2.2 | REACTOME COMMON PATHWAY | Genes involved in Common Pathway |
0.1 | 1.8 | REACTOME INSULIN SYNTHESIS AND PROCESSING | Genes involved in Insulin Synthesis and Processing |
0.0 | 1.2 | REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES | Genes involved in Chemokine receptors bind chemokines |
0.0 | 1.1 | REACTOME TIGHT JUNCTION INTERACTIONS | Genes involved in Tight junction interactions |
0.0 | 1.0 | REACTOME SIGNALING BY BMP | Genes involved in Signaling by BMP |