avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Nkx3-2 | mm10_v2_chr5_-_41764493_41764496 | 0.50 | 1.8e-03 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr14_-_20269162 Show fit | 8.70 |
ENSMUST00000024155.7
|
potassium channel, subfamily K, member 16 |
|
chr5_+_90490714 Show fit | 6.79 |
ENSMUST00000042755.3
|
alpha fetoprotein |
|
chr7_-_103853199 Show fit | 5.38 |
ENSMUST00000033229.3
|
hemoglobin Y, beta-like embryonic chain |
|
chr8_+_80494032 Show fit | 5.26 |
ENSMUST00000063359.6
|
glycophorin A |
|
chr1_+_91366412 Show fit | 4.81 |
ENSMUST00000086861.5
|
family with sequence similarity 132, member B |
|
chrX_-_136203637 Show fit | 4.64 |
ENSMUST00000151592.1
ENSMUST00000131510.1 ENSMUST00000066819.4 |
transcription elongation factor A (SII)-like 5 |
|
chr7_+_143005770 Show fit | 4.63 |
ENSMUST00000143512.1
|
tetraspanin 32 |
|
chr7_+_143005677 Show fit | 4.58 |
ENSMUST00000082008.5
ENSMUST00000105925.1 ENSMUST00000105924.1 |
tetraspanin 32 |
|
chr14_+_80000292 Show fit | 4.55 |
ENSMUST00000088735.3
|
olfactomedin 4 |
|
chr1_-_75133866 Show fit | 4.49 |
ENSMUST00000027405.4
|
solute carrier family 23 (nucleobase transporters), member 3 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.4 | 13.7 | GO:0030886 | negative regulation of myeloid dendritic cell activation(GO:0030886) |
0.6 | 8.7 | GO:0030322 | stabilization of membrane potential(GO:0030322) |
0.7 | 6.9 | GO:0015727 | lactate transport(GO:0015727) lactate transmembrane transport(GO:0035873) plasma membrane lactate transport(GO:0035879) |
0.4 | 6.8 | GO:0001542 | ovulation from ovarian follicle(GO:0001542) |
0.2 | 6.6 | GO:0033235 | positive regulation of protein sumoylation(GO:0033235) |
1.0 | 6.1 | GO:2000987 | positive regulation of fear response(GO:1903367) positive regulation of behavioral fear response(GO:2000987) |
0.7 | 5.4 | GO:0015671 | oxygen transport(GO:0015671) |
0.7 | 5.3 | GO:0007016 | cytoskeletal anchoring at plasma membrane(GO:0007016) |
0.1 | 5.3 | GO:1900026 | positive regulation of substrate adhesion-dependent cell spreading(GO:1900026) |
0.2 | 4.6 | GO:0032460 | negative regulation of protein oligomerization(GO:0032460) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
3.4 | 13.7 | GO:0070442 | integrin alphaIIb-beta3 complex(GO:0070442) |
0.0 | 6.8 | GO:0031965 | nuclear membrane(GO:0031965) |
1.5 | 6.1 | GO:0032280 | symmetric synapse(GO:0032280) |
0.7 | 5.4 | GO:0005833 | hemoglobin complex(GO:0005833) |
0.0 | 5.4 | GO:0009897 | external side of plasma membrane(GO:0009897) |
0.3 | 4.6 | GO:0042581 | specific granule(GO:0042581) |
0.3 | 3.7 | GO:0031254 | uropod(GO:0001931) cell trailing edge(GO:0031254) |
0.0 | 2.7 | GO:0031985 | Golgi cisterna(GO:0031985) |
0.1 | 2.4 | GO:0035098 | ESC/E(Z) complex(GO:0035098) |
0.0 | 2.4 | GO:0032993 | protein-DNA complex(GO:0032993) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 8.7 | GO:0022841 | potassium ion leak channel activity(GO:0022841) |
0.2 | 7.7 | GO:0050699 | WW domain binding(GO:0050699) |
1.0 | 6.9 | GO:0015129 | lactate transmembrane transporter activity(GO:0015129) |
1.7 | 6.8 | GO:0004566 | beta-glucuronidase activity(GO:0004566) |
0.3 | 6.6 | GO:0031681 | G-protein beta-subunit binding(GO:0031681) |
0.9 | 6.1 | GO:0001515 | opioid peptide activity(GO:0001515) |
1.3 | 5.4 | GO:0031721 | hemoglobin alpha binding(GO:0031721) |
0.6 | 4.3 | GO:0004687 | myosin light chain kinase activity(GO:0004687) |
0.3 | 4.3 | GO:0050693 | LBD domain binding(GO:0050693) |
0.5 | 3.9 | GO:0016308 | 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 5.9 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.1 | 5.4 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.1 | 4.5 | PID WNT CANONICAL PATHWAY | Canonical Wnt signaling pathway |
0.0 | 4.3 | PID SMAD2 3NUCLEAR PATHWAY | Regulation of nuclear SMAD2/3 signaling |
0.1 | 4.0 | PID AP1 PATHWAY | AP-1 transcription factor network |
0.1 | 3.8 | PID EPHB FWD PATHWAY | EPHB forward signaling |
0.0 | 3.5 | PID CMYB PATHWAY | C-MYB transcription factor network |
0.0 | 2.4 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.1 | 2.0 | ST MYOCYTE AD PATHWAY | Myocyte Adrenergic Pathway is a specific case of the generalized Adrenergic Pathway. |
0.1 | 1.8 | SA B CELL RECEPTOR COMPLEXES | Antigen binding to B cell receptors activates protein tyrosine kinases, such as the Src family, which ultimate activate MAP kinases. |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 8.7 | REACTOME TANDEM PORE DOMAIN POTASSIUM CHANNELS | Genes involved in Tandem pore domain potassium channels |
0.5 | 6.9 | REACTOME BILE SALT AND ORGANIC ANION SLC TRANSPORTERS | Genes involved in Bile salt and organic anion SLC transporters |
0.0 | 5.5 | REACTOME PEPTIDE LIGAND BINDING RECEPTORS | Genes involved in Peptide ligand-binding receptors |
0.1 | 3.7 | REACTOME SYNTHESIS OF PIPS AT THE PLASMA MEMBRANE | Genes involved in Synthesis of PIPs at the plasma membrane |
0.2 | 2.1 | REACTOME REGULATION OF PYRUVATE DEHYDROGENASE PDH COMPLEX | Genes involved in Regulation of pyruvate dehydrogenase (PDH) complex |
0.1 | 2.1 | REACTOME ACYL CHAIN REMODELLING OF PS | Genes involved in Acyl chain remodelling of PS |
0.1 | 1.7 | REACTOME GAP JUNCTION DEGRADATION | Genes involved in Gap junction degradation |
0.0 | 1.7 | REACTOME MUSCLE CONTRACTION | Genes involved in Muscle contraction |
0.1 | 1.6 | REACTOME OTHER SEMAPHORIN INTERACTIONS | Genes involved in Other semaphorin interactions |
0.0 | 1.6 | REACTOME NOTCH1 INTRACELLULAR DOMAIN REGULATES TRANSCRIPTION | Genes involved in NOTCH1 Intracellular Domain Regulates Transcription |