avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Nkx6-1 | mm10_v2_chr5_-_101665195_101665226 | 0.30 | 7.2e-02 | Click! |
Hesx1 | mm10_v2_chr14_+_27000362_27000507 | 0.27 | 1.1e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr5_-_62765618 Show fit | 4.35 |
ENSMUST00000159470.1
|
ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 |
|
chr10_+_75564086 Show fit | 3.05 |
ENSMUST00000141062.1
ENSMUST00000152657.1 |
gamma-glutamyltransferase 1 |
|
chr3_-_75270073 Show fit | 2.95 |
ENSMUST00000039047.4
|
serine (or cysteine) peptidase inhibitor, clade I, member 2 |
|
chr18_+_4993795 Show fit | 2.60 |
ENSMUST00000153016.1
|
supervillin |
|
chr15_-_101694299 Show fit | 2.05 |
ENSMUST00000023788.6
|
keratin 6A |
|
chr14_+_27000362 Show fit | 2.01 |
ENSMUST00000035433.8
|
homeobox gene expressed in ES cells |
|
chr12_+_38780284 Show fit | 1.89 |
ENSMUST00000162563.1
ENSMUST00000161164.1 ENSMUST00000160996.1 |
ets variant gene 1 |
|
chr3_-_116253467 Show fit | 1.79 |
ENSMUST00000090473.5
|
G-protein coupled receptor 88 |
|
chr2_+_69897255 Show fit | 1.76 |
ENSMUST00000131553.1
|
ubiquitin protein ligase E3 component n-recognin 3 |
|
chr2_+_84734050 Show fit | 1.73 |
ENSMUST00000090729.2
|
yippee-like 4 (Drosophila) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 3.5 | GO:0048935 | peripheral nervous system neuron differentiation(GO:0048934) peripheral nervous system neuron development(GO:0048935) |
0.4 | 3.0 | GO:1901748 | leukotriene D4 metabolic process(GO:1901748) leukotriene D4 biosynthetic process(GO:1901750) |
0.3 | 3.0 | GO:0030916 | otic vesicle formation(GO:0030916) |
0.7 | 2.8 | GO:0035524 | proline transmembrane transport(GO:0035524) |
0.0 | 2.8 | GO:0010466 | negative regulation of peptidase activity(GO:0010466) |
0.5 | 2.5 | GO:0015676 | vanadium ion transport(GO:0015676) lead ion transport(GO:0015692) |
0.1 | 2.1 | GO:0044146 | negative regulation of growth of symbiont involved in interaction with host(GO:0044146) |
0.0 | 2.1 | GO:0007519 | skeletal muscle tissue development(GO:0007519) |
0.1 | 2.0 | GO:2000251 | positive regulation of actin cytoskeleton reorganization(GO:2000251) |
0.5 | 1.9 | GO:0061743 | motor learning(GO:0061743) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.4 | GO:0043034 | costamere(GO:0043034) |
0.5 | 2.5 | GO:0070826 | paraferritin complex(GO:0070826) |
0.2 | 2.0 | GO:0071439 | clathrin complex(GO:0071439) |
0.0 | 1.9 | GO:0000792 | heterochromatin(GO:0000792) |
0.0 | 1.7 | GO:0016459 | myosin complex(GO:0016459) |
0.0 | 1.7 | GO:0042641 | actomyosin(GO:0042641) |
0.1 | 1.5 | GO:0031527 | filopodium membrane(GO:0031527) |
0.0 | 1.4 | GO:0031430 | M band(GO:0031430) |
0.0 | 1.4 | GO:0097440 | apical dendrite(GO:0097440) |
0.0 | 1.3 | GO:0000786 | nucleosome(GO:0000786) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.4 | GO:0005547 | phosphatidylinositol-3,4,5-trisphosphate binding(GO:0005547) |
0.0 | 3.9 | GO:0030695 | GTPase regulator activity(GO:0030695) |
0.0 | 3.5 | GO:0004867 | serine-type endopeptidase inhibitor activity(GO:0004867) |
0.3 | 3.0 | GO:0036374 | glutathione hydrolase activity(GO:0036374) |
0.3 | 2.8 | GO:0015193 | L-proline transmembrane transporter activity(GO:0015193) |
0.5 | 2.5 | GO:0015094 | cadmium ion transmembrane transporter activity(GO:0015086) lead ion transmembrane transporter activity(GO:0015094) vanadium ion transmembrane transporter activity(GO:0015100) ferrous iron uptake transmembrane transporter activity(GO:0015639) |
0.0 | 2.3 | GO:0030507 | spectrin binding(GO:0030507) |
0.0 | 2.2 | GO:0047485 | protein N-terminus binding(GO:0047485) |
0.0 | 2.2 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.1 | 1.8 | GO:0008327 | methyl-CpG binding(GO:0008327) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.5 | PID ARF6 PATHWAY | Arf6 signaling events |
0.1 | 3.7 | PID P38 MK2 PATHWAY | p38 signaling mediated by MAPKAP kinases |
0.0 | 3.4 | PID AR PATHWAY | Coregulation of Androgen receptor activity |
0.1 | 2.5 | PID HIF2PATHWAY | HIF-2-alpha transcription factor network |
0.0 | 2.2 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.0 | 2.2 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.0 | 2.1 | PID ILK PATHWAY | Integrin-linked kinase signaling |
0.0 | 2.0 | PID BETA CATENIN NUC PATHWAY | Regulation of nuclear beta catenin signaling and target gene transcription |
0.0 | 1.8 | PID WNT NONCANONICAL PATHWAY | Noncanonical Wnt signaling pathway |
0.0 | 1.7 | PID NETRIN PATHWAY | Netrin-mediated signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 6.2 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.1 | 3.0 | REACTOME GLUTATHIONE CONJUGATION | Genes involved in Glutathione conjugation |
0.0 | 2.9 | REACTOME NETRIN1 SIGNALING | Genes involved in Netrin-1 signaling |
0.1 | 1.9 | REACTOME CELL EXTRACELLULAR MATRIX INTERACTIONS | Genes involved in Cell-extracellular matrix interactions |
0.1 | 1.5 | REACTOME TERMINATION OF O GLYCAN BIOSYNTHESIS | Genes involved in Termination of O-glycan biosynthesis |
0.0 | 1.4 | REACTOME RNA POL I PROMOTER OPENING | Genes involved in RNA Polymerase I Promoter Opening |
0.1 | 1.3 | REACTOME INTRINSIC PATHWAY | Genes involved in Intrinsic Pathway |
0.0 | 1.2 | REACTOME CELL JUNCTION ORGANIZATION | Genes involved in Cell junction organization |
0.0 | 1.1 | REACTOME GLUCOSE TRANSPORT | Genes involved in Glucose transport |
0.0 | 1.1 | REACTOME APOPTOTIC EXECUTION PHASE | Genes involved in Apoptotic execution phase |