avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Nr1i3 | mm10_v2_chr1_+_171214013_171214045 | 0.65 | 1.6e-05 | Click! |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.4 | 38.3 | GO:0006957 | complement activation, alternative pathway(GO:0006957) |
1.8 | 25.8 | GO:0015747 | urate transport(GO:0015747) |
0.5 | 24.2 | GO:0006953 | acute-phase response(GO:0006953) |
7.6 | 22.9 | GO:0060752 | negative regulation of intestinal phytosterol absorption(GO:0010949) negative regulation of intestinal cholesterol absorption(GO:0045796) intestinal phytosterol absorption(GO:0060752) negative regulation of intestinal lipid absorption(GO:1904730) |
0.3 | 22.1 | GO:0006635 | fatty acid beta-oxidation(GO:0006635) |
0.9 | 20.7 | GO:0043567 | regulation of insulin-like growth factor receptor signaling pathway(GO:0043567) |
3.4 | 20.6 | GO:1904073 | regulation of trophectodermal cell proliferation(GO:1904073) positive regulation of trophectodermal cell proliferation(GO:1904075) |
5.1 | 20.5 | GO:0010901 | regulation of very-low-density lipoprotein particle remodeling(GO:0010901) |
0.5 | 19.7 | GO:0006958 | complement activation, classical pathway(GO:0006958) |
0.7 | 18.5 | GO:0035634 | response to stilbenoid(GO:0035634) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 232.9 | GO:0005783 | endoplasmic reticulum(GO:0005783) |
2.7 | 60.0 | GO:0042627 | chylomicron(GO:0042627) |
0.2 | 59.8 | GO:0016324 | apical plasma membrane(GO:0016324) |
0.2 | 46.6 | GO:0005743 | mitochondrial inner membrane(GO:0005743) |
0.3 | 42.4 | GO:0072562 | blood microparticle(GO:0072562) |
0.2 | 33.9 | GO:0005759 | mitochondrial matrix(GO:0005759) |
2.9 | 26.0 | GO:0042567 | insulin-like growth factor ternary complex(GO:0042567) |
0.5 | 24.0 | GO:0030964 | mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271) |
7.6 | 22.9 | GO:0043190 | ATP-binding cassette (ABC) transporter complex(GO:0043190) |
1.6 | 17.3 | GO:1990712 | HFE-transferrin receptor complex(GO:1990712) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 48.3 | GO:0052689 | carboxylic ester hydrolase activity(GO:0052689) |
1.4 | 36.9 | GO:0008392 | arachidonic acid epoxygenase activity(GO:0008392) |
3.8 | 30.0 | GO:0060228 | phosphatidylcholine-sterol O-acyltransferase activator activity(GO:0060228) |
1.9 | 28.8 | GO:0015143 | urate transmembrane transporter activity(GO:0015143) salt transmembrane transporter activity(GO:1901702) |
0.7 | 27.6 | GO:0015020 | glucuronosyltransferase activity(GO:0015020) |
8.0 | 24.0 | GO:0052871 | tocopherol omega-hydroxylase activity(GO:0052870) alpha-tocopherol omega-hydroxylase activity(GO:0052871) |
0.9 | 22.2 | GO:0005550 | pheromone binding(GO:0005550) |
7.0 | 20.9 | GO:0050051 | leukotriene-B4 20-monooxygenase activity(GO:0050051) |
4.0 | 20.1 | GO:0008390 | testosterone 16-alpha-hydroxylase activity(GO:0008390) |
0.7 | 18.1 | GO:0008395 | steroid hydroxylase activity(GO:0008395) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 20.5 | PID HNF3A PATHWAY | FOXA1 transcription factor network |
0.4 | 20.3 | PID IGF1 PATHWAY | IGF1 pathway |
0.1 | 16.7 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.2 | 12.7 | PID PTP1B PATHWAY | Signaling events mediated by PTP1B |
0.2 | 10.7 | NABA BASEMENT MEMBRANES | Genes encoding structural components of basement membranes |
0.2 | 10.6 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.3 | 10.5 | PID TCR CALCIUM PATHWAY | Calcium signaling in the CD4+ TCR pathway |
0.2 | 9.7 | PID RXR VDR PATHWAY | RXR and RAR heterodimerization with other nuclear receptor |
0.2 | 9.6 | ST PHOSPHOINOSITIDE 3 KINASE PATHWAY | PI3K Pathway |
0.5 | 9.0 | PID UPA UPAR PATHWAY | Urokinase-type plasminogen activator (uPA) and uPAR-mediated signaling |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 54.5 | REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES | Genes involved in Metabolism of amino acids and derivatives |
0.6 | 43.6 | REACTOME RESPIRATORY ELECTRON TRANSPORT | Genes involved in Respiratory electron transport |
1.6 | 42.7 | REACTOME CHYLOMICRON MEDIATED LIPID TRANSPORT | Genes involved in Chylomicron-mediated lipid transport |
0.6 | 24.3 | REACTOME LIPID DIGESTION MOBILIZATION AND TRANSPORT | Genes involved in Lipid digestion, mobilization, and transport |
1.5 | 23.0 | REACTOME INITIAL TRIGGERING OF COMPLEMENT | Genes involved in Initial triggering of complement |
0.2 | 22.5 | REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY | Genes involved in Nuclear Receptor transcription pathway |
0.9 | 19.0 | REACTOME ALPHA LINOLENIC ACID ALA METABOLISM | Genes involved in alpha-linolenic acid (ALA) metabolism |
0.2 | 15.8 | REACTOME METABOLISM OF VITAMINS AND COFACTORS | Genes involved in Metabolism of vitamins and cofactors |
1.1 | 14.1 | REACTOME ENDOGENOUS STEROLS | Genes involved in Endogenous sterols |
0.7 | 14.0 | REACTOME PROLACTIN RECEPTOR SIGNALING | Genes involved in Prolactin receptor signaling |