avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Nr2c2 | mm10_v2_chr6_+_92091378_92091390 | -0.66 | 1.1e-05 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr4_-_62087261 Show fit | 24.56 |
ENSMUST00000107488.3
ENSMUST00000107472.1 ENSMUST00000084531.4 |
major urinary protein 3 |
|
chr4_-_61303998 Show fit | 24.31 |
ENSMUST00000071005.8
ENSMUST00000075206.5 |
major urinary protein 14 |
|
chr4_-_60501903 Show fit | 23.90 |
ENSMUST00000084548.4
ENSMUST00000103012.3 ENSMUST00000107499.3 |
major urinary protein 1 |
|
chr4_-_61303802 Show fit | 23.18 |
ENSMUST00000125461.1
|
major urinary protein 14 |
|
chr4_-_62054112 Show fit | 22.71 |
ENSMUST00000074018.3
|
major urinary protein 20 |
|
chr4_-_60741275 Show fit | 22.66 |
ENSMUST00000117932.1
|
major urinary protein 12 |
|
chr19_+_46131888 Show fit | 19.81 |
ENSMUST00000043739.3
|
elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 3 |
|
chr7_-_99695628 Show fit | 16.69 |
ENSMUST00000145381.1
|
solute carrier organic anion transporter family, member 2b1 |
|
chr7_-_99695809 Show fit | 16.12 |
ENSMUST00000107086.2
|
solute carrier organic anion transporter family, member 2b1 |
|
chr7_-_99695572 Show fit | 15.54 |
ENSMUST00000137914.1
|
solute carrier organic anion transporter family, member 2b1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
12.1 | 48.4 | GO:0071718 | sodium-independent icosanoid transport(GO:0071718) |
0.9 | 24.6 | GO:0035634 | response to stilbenoid(GO:0035634) |
2.0 | 24.2 | GO:0019367 | fatty acid elongation, saturated fatty acid(GO:0019367) fatty acid elongation, unsaturated fatty acid(GO:0019368) fatty acid elongation, monounsaturated fatty acid(GO:0034625) fatty acid elongation, polyunsaturated fatty acid(GO:0034626) |
2.2 | 23.9 | GO:0071394 | cellular response to testosterone stimulus(GO:0071394) |
3.8 | 22.7 | GO:0008355 | olfactory learning(GO:0008355) |
0.2 | 13.6 | GO:0019369 | arachidonic acid metabolic process(GO:0019369) |
3.1 | 12.5 | GO:0006069 | ethanol oxidation(GO:0006069) |
0.3 | 12.2 | GO:0097031 | NADH dehydrogenase complex assembly(GO:0010257) mitochondrial respiratory chain complex I assembly(GO:0032981) mitochondrial respiratory chain complex I biogenesis(GO:0097031) |
1.8 | 8.9 | GO:0036151 | phosphatidylcholine acyl-chain remodeling(GO:0036151) |
1.2 | 8.4 | GO:0006108 | malate metabolic process(GO:0006108) regulation of NADP metabolic process(GO:1902031) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 48.1 | GO:0009925 | basal plasma membrane(GO:0009925) |
0.2 | 31.7 | GO:0030176 | integral component of endoplasmic reticulum membrane(GO:0030176) |
0.0 | 29.3 | GO:0005783 | endoplasmic reticulum(GO:0005783) |
0.0 | 21.1 | GO:0005739 | mitochondrion(GO:0005739) |
0.1 | 18.3 | GO:0005759 | mitochondrial matrix(GO:0005759) |
0.1 | 17.5 | GO:0005743 | mitochondrial inner membrane(GO:0005743) |
0.3 | 14.2 | GO:0045271 | mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271) |
0.1 | 11.3 | GO:0005811 | lipid particle(GO:0005811) |
0.3 | 8.9 | GO:0097038 | perinuclear endoplasmic reticulum(GO:0097038) |
0.2 | 8.7 | GO:0032588 | trans-Golgi network membrane(GO:0032588) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.3 | 48.4 | GO:0015125 | bile acid transmembrane transporter activity(GO:0015125) |
15.5 | 46.6 | GO:0005186 | pheromone activity(GO:0005186) |
1.0 | 24.6 | GO:0005550 | pheromone binding(GO:0005550) |
2.0 | 24.2 | GO:0009922 | fatty acid elongase activity(GO:0009922) 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338) |
0.3 | 20.3 | GO:0008395 | steroid hydroxylase activity(GO:0008395) |
4.2 | 12.5 | GO:0004024 | NADPH:quinone reductase activity(GO:0003960) alcohol dehydrogenase activity, zinc-dependent(GO:0004024) |
3.0 | 11.8 | GO:0070653 | high-density lipoprotein particle receptor binding(GO:0070653) |
2.0 | 9.8 | GO:0003989 | acetyl-CoA carboxylase activity(GO:0003989) |
3.0 | 8.9 | GO:0030156 | benzodiazepine receptor binding(GO:0030156) |
0.3 | 8.7 | GO:0008137 | NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 8.3 | PID HNF3A PATHWAY | FOXA1 transcription factor network |
0.1 | 5.7 | PID HDAC CLASSI PATHWAY | Signaling events mediated by HDAC Class I |
0.1 | 5.0 | PID TOLL ENDOGENOUS PATHWAY | Endogenous TLR signaling |
0.1 | 4.7 | ST WNT BETA CATENIN PATHWAY | Wnt/beta-catenin Pathway |
0.1 | 4.5 | PID RXR VDR PATHWAY | RXR and RAR heterodimerization with other nuclear receptor |
0.0 | 4.3 | PID MYC ACTIV PATHWAY | Validated targets of C-MYC transcriptional activation |
0.0 | 3.1 | PID TAP63 PATHWAY | Validated transcriptional targets of TAp63 isoforms |
0.0 | 2.9 | PID TGFBR PATHWAY | TGF-beta receptor signaling |
0.1 | 2.4 | PID ALK1 PATHWAY | ALK1 signaling events |
0.1 | 2.0 | PID CONE PATHWAY | Visual signal transduction: Cones |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
4.1 | 44.8 | REACTOME TRANSPORT OF ORGANIC ANIONS | Genes involved in Transport of organic anions |
0.9 | 25.2 | REACTOME SYNTHESIS OF VERY LONG CHAIN FATTY ACYL COAS | Genes involved in Synthesis of very long-chain fatty acyl-CoAs |
0.2 | 13.7 | REACTOME RESPIRATORY ELECTRON TRANSPORT | Genes involved in Respiratory electron transport |
2.1 | 12.5 | REACTOME ETHANOL OXIDATION | Genes involved in Ethanol oxidation |
0.4 | 10.7 | REACTOME CHYLOMICRON MEDIATED LIPID TRANSPORT | Genes involved in Chylomicron-mediated lipid transport |
0.1 | 10.1 | REACTOME PPARA ACTIVATES GENE EXPRESSION | Genes involved in PPARA Activates Gene Expression |
0.6 | 7.5 | REACTOME SYNTHESIS OF BILE ACIDS AND BILE SALTS VIA 24 HYDROXYCHOLESTEROL | Genes involved in Synthesis of bile acids and bile salts via 24-hydroxycholesterol |
0.5 | 7.2 | REACTOME BILE SALT AND ORGANIC ANION SLC TRANSPORTERS | Genes involved in Bile salt and organic anion SLC transporters |
0.1 | 6.9 | REACTOME INTEGRATION OF ENERGY METABOLISM | Genes involved in Integration of energy metabolism |
0.5 | 6.6 | REACTOME ALPHA LINOLENIC ACID ALA METABOLISM | Genes involved in alpha-linolenic acid (ALA) metabolism |