avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Nr2f6 | mm10_v2_chr8_-_71381907_71381977 | -0.63 | 4.4e-05 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr16_+_33794008 Show fit | 9.17 |
ENSMUST00000115044.1
|
mucin 13, epithelial transmembrane |
|
chr16_+_33794345 Show fit | 9.16 |
ENSMUST00000023520.6
|
mucin 13, epithelial transmembrane |
|
chr10_-_79788924 Show fit | 9.09 |
ENSMUST00000020573.6
|
protease, serine 57 |
|
chr5_+_76840597 Show fit | 7.85 |
ENSMUST00000120639.2
ENSMUST00000163347.1 ENSMUST00000121851.1 |
RIKEN cDNA C530008M17 gene |
|
chr2_+_155611175 Show fit | 7.07 |
ENSMUST00000092995.5
|
myosin, heavy chain 7B, cardiac muscle, beta |
|
chr19_+_10001669 Show fit | 6.70 |
ENSMUST00000121418.1
|
RAB3A interacting protein (rabin3)-like 1 |
|
chr11_+_32283511 Show fit | 6.40 |
ENSMUST00000093209.3
|
hemoglobin alpha, adult chain 1 |
|
chr5_-_137741601 Show fit | 5.36 |
ENSMUST00000119498.1
ENSMUST00000061789.7 |
neuronal tyrosine-phosphorylated phosphoinositide 3-kinase adaptor 1 |
|
chr11_-_33513736 Show fit | 5.09 |
ENSMUST00000102815.3
|
RAN binding protein 17 |
|
chr11_+_116198853 Show fit | 4.82 |
ENSMUST00000021130.6
|
TEN1 telomerase capping complex subunit |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.1 | 18.3 | GO:0030277 | maintenance of gastrointestinal epithelium(GO:0030277) |
0.1 | 8.4 | GO:0006611 | protein export from nucleus(GO:0006611) |
0.2 | 6.4 | GO:0035634 | response to stilbenoid(GO:0035634) |
0.1 | 5.4 | GO:0051865 | protein autoubiquitination(GO:0051865) |
0.0 | 5.4 | GO:0014065 | phosphatidylinositol 3-kinase signaling(GO:0014065) |
0.2 | 4.8 | GO:0032211 | negative regulation of telomere maintenance via telomerase(GO:0032211) |
0.5 | 4.6 | GO:0048170 | positive regulation of long-term neuronal synaptic plasticity(GO:0048170) |
1.5 | 4.5 | GO:0036088 | D-serine catabolic process(GO:0036088) D-alanine family amino acid metabolic process(GO:0046144) D-alanine metabolic process(GO:0046436) D-alanine catabolic process(GO:0055130) |
0.1 | 4.5 | GO:0050829 | defense response to Gram-negative bacterium(GO:0050829) |
0.4 | 4.3 | GO:0070940 | dephosphorylation of RNA polymerase II C-terminal domain(GO:0070940) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 13.5 | GO:0016324 | apical plasma membrane(GO:0016324) |
3.0 | 9.1 | GO:0034774 | secretory granule lumen(GO:0034774) cytoplasmic membrane-bounded vesicle lumen(GO:0060205) |
0.1 | 8.4 | GO:0005643 | nuclear pore(GO:0005643) |
0.5 | 7.1 | GO:0097512 | cardiac myofibril(GO:0097512) |
1.3 | 6.4 | GO:0031838 | haptoglobin-hemoglobin complex(GO:0031838) |
0.5 | 4.8 | GO:0000783 | telomere cap complex(GO:0000782) nuclear telomere cap complex(GO:0000783) |
0.1 | 4.5 | GO:0097440 | apical dendrite(GO:0097440) |
0.0 | 4.5 | GO:0031225 | anchored component of membrane(GO:0031225) |
0.0 | 4.4 | GO:0005741 | mitochondrial outer membrane(GO:0005741) |
0.3 | 4.2 | GO:0005861 | troponin complex(GO:0005861) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 11.4 | GO:0008201 | heparin binding(GO:0008201) |
0.1 | 9.4 | GO:0003774 | motor activity(GO:0003774) |
0.8 | 8.4 | GO:0005049 | nuclear export signal receptor activity(GO:0005049) |
0.1 | 6.7 | GO:0017112 | Rab guanyl-nucleotide exchange factor activity(GO:0017112) |
1.6 | 6.4 | GO:0031720 | haptoglobin binding(GO:0031720) |
0.1 | 6.0 | GO:0045182 | translation regulator activity(GO:0045182) |
0.1 | 5.5 | GO:0015485 | cholesterol binding(GO:0015485) |
0.1 | 4.8 | GO:0042162 | telomeric DNA binding(GO:0042162) |
0.0 | 4.6 | GO:0004867 | serine-type endopeptidase inhibitor activity(GO:0004867) |
1.1 | 4.5 | GO:0003884 | D-amino-acid oxidase activity(GO:0003884) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 18.3 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.1 | 3.8 | PID IL1 PATHWAY | IL1-mediated signaling events |
0.1 | 3.6 | PID FOXM1 PATHWAY | FOXM1 transcription factor network |
0.0 | 3.6 | PID P53 DOWNSTREAM PATHWAY | Direct p53 effectors |
0.1 | 3.5 | SA CASPASE CASCADE | Apoptosis is mediated by caspases, cysteine proteases arranged in a proteolytic cascade. |
0.0 | 3.4 | PID AJDISS 2PATHWAY | Posttranslational regulation of adherens junction stability and dissassembly |
0.0 | 3.1 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.0 | 2.0 | PID MYC REPRESS PATHWAY | Validated targets of C-MYC transcriptional repression |
0.0 | 1.7 | PID ERA GENOMIC PATHWAY | Validated nuclear estrogen receptor alpha network |
0.0 | 1.5 | SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES | Genes related to regulation of the actin cytoskeleton |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.8 | 18.3 | REACTOME TERMINATION OF O GLYCAN BIOSYNTHESIS | Genes involved in Termination of O-glycan biosynthesis |
0.0 | 6.3 | REACTOME TRANSLATION | Genes involved in Translation |
0.1 | 5.9 | REACTOME METABOLISM OF STEROID HORMONES AND VITAMINS A AND D | Genes involved in Metabolism of steroid hormones and vitamins A and D |
0.1 | 4.2 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.1 | 3.8 | REACTOME IL1 SIGNALING | Genes involved in Interleukin-1 signaling |
0.1 | 3.6 | REACTOME G1 PHASE | Genes involved in G1 Phase |
0.0 | 3.3 | REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES | Genes involved in Metabolism of amino acids and derivatives |
0.2 | 2.7 | REACTOME SLBP DEPENDENT PROCESSING OF REPLICATION DEPENDENT HISTONE PRE MRNAS | Genes involved in SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs |
0.2 | 2.6 | REACTOME ASSOCIATION OF LICENSING FACTORS WITH THE PRE REPLICATIVE COMPLEX | Genes involved in Association of licensing factors with the pre-replicative complex |
0.1 | 2.6 | REACTOME TRANSFERRIN ENDOCYTOSIS AND RECYCLING | Genes involved in Transferrin endocytosis and recycling |