avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Nr4a2 | mm10_v2_chr2_-_57113053_57113072 | -0.20 | 2.5e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr9_-_22002599 Show fit | 3.22 |
ENSMUST00000115336.2
ENSMUST00000044926.5 |
coiled-coil domain containing 151 |
|
chr19_-_8405060 Show fit | 3.16 |
ENSMUST00000064507.5
ENSMUST00000120540.1 ENSMUST00000096269.4 |
solute carrier family 22, member 30 |
|
chr7_-_14438538 Show fit | 2.51 |
ENSMUST00000168252.2
|
RIKEN cDNA 2810007J24 gene |
|
chr1_+_167618246 Show fit | 2.13 |
ENSMUST00000111380.1
|
retinoid X receptor gamma |
|
chr10_-_92375367 Show fit | 2.09 |
ENSMUST00000182870.1
|
predicted gene, 20757 |
|
chr8_+_104847061 Show fit | 1.94 |
ENSMUST00000055052.5
|
carboxylesterase 2C |
|
chr6_-_59024340 Show fit | 1.59 |
ENSMUST00000173193.1
|
family with sequence similarity 13, member A |
|
chr6_-_59024470 Show fit | 1.54 |
ENSMUST00000089860.5
|
family with sequence similarity 13, member A |
|
chr8_-_64733534 Show fit | 1.46 |
ENSMUST00000141021.1
|
sterol-C4-methyl oxidase-like |
|
chr5_-_66151903 Show fit | 1.31 |
ENSMUST00000167950.1
|
RNA binding motif protein 47 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 3.2 | GO:0015747 | urate transport(GO:0015747) |
0.2 | 3.2 | GO:0036158 | outer dynein arm assembly(GO:0036158) |
0.2 | 2.5 | GO:0016554 | cytidine to uridine editing(GO:0016554) |
0.1 | 2.1 | GO:1901522 | positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus(GO:1901522) |
0.3 | 1.7 | GO:0032915 | positive regulation of transforming growth factor beta2 production(GO:0032915) |
0.1 | 1.7 | GO:2001256 | regulation of store-operated calcium entry(GO:2001256) |
0.1 | 1.5 | GO:0036295 | cellular response to increased oxygen levels(GO:0036295) |
0.0 | 1.4 | GO:0046847 | filopodium assembly(GO:0046847) |
0.4 | 1.2 | GO:0021933 | radial glia guided migration of cerebellar granule cell(GO:0021933) |
0.3 | 1.2 | GO:2000158 | positive regulation of ubiquitin-specific protease activity(GO:2000158) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.2 | GO:0005814 | centriole(GO:0005814) |
0.0 | 1.8 | GO:0043034 | costamere(GO:0043034) |
0.0 | 1.7 | GO:0035861 | site of double-strand break(GO:0035861) |
0.1 | 1.5 | GO:0033180 | proton-transporting V-type ATPase, V1 domain(GO:0033180) |
0.0 | 1.0 | GO:0030964 | mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271) |
0.0 | 1.0 | GO:0005811 | lipid particle(GO:0005811) |
0.1 | 0.9 | GO:0031415 | NatA complex(GO:0031415) |
0.0 | 0.8 | GO:0001917 | photoreceptor inner segment(GO:0001917) |
0.0 | 0.8 | GO:0016235 | aggresome(GO:0016235) |
0.1 | 0.7 | GO:0044233 | ER-mitochondrion membrane contact site(GO:0044233) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 3.2 | GO:0015143 | urate transmembrane transporter activity(GO:0015143) salt transmembrane transporter activity(GO:1901702) |
0.2 | 2.1 | GO:0004886 | 9-cis retinoic acid receptor activity(GO:0004886) |
0.2 | 1.8 | GO:0031802 | type 5 metabotropic glutamate receptor binding(GO:0031802) |
0.2 | 1.7 | GO:0008140 | cAMP response element binding protein binding(GO:0008140) |
0.1 | 1.5 | GO:0046961 | proton-transporting ATPase activity, rotational mechanism(GO:0046961) |
0.3 | 1.2 | GO:0035800 | deubiquitinase activator activity(GO:0035800) |
0.2 | 1.0 | GO:0004308 | exo-alpha-sialidase activity(GO:0004308) alpha-sialidase activity(GO:0016997) exo-alpha-(2->3)-sialidase activity(GO:0052794) exo-alpha-(2->6)-sialidase activity(GO:0052795) exo-alpha-(2->8)-sialidase activity(GO:0052796) |
0.0 | 0.9 | GO:0030507 | spectrin binding(GO:0030507) |
0.0 | 0.8 | GO:0016651 | oxidoreductase activity, acting on NAD(P)H(GO:0016651) |
0.1 | 0.7 | GO:0042030 | ATPase inhibitor activity(GO:0042030) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.1 | PID RXR VDR PATHWAY | RXR and RAR heterodimerization with other nuclear receptor |
0.0 | 1.7 | SA B CELL RECEPTOR COMPLEXES | Antigen binding to B cell receptors activates protein tyrosine kinases, such as the Src family, which ultimate activate MAP kinases. |
0.0 | 1.3 | ST G ALPHA S PATHWAY | G alpha s Pathway |
0.0 | 1.3 | PID REG GR PATHWAY | Glucocorticoid receptor regulatory network |
0.0 | 1.1 | PID NETRIN PATHWAY | Netrin-mediated signaling events |
0.0 | 0.8 | PID RHODOPSIN PATHWAY | Visual signal transduction: Rods |
0.0 | 0.8 | PID NFAT TFPATHWAY | Calcineurin-regulated NFAT-dependent transcription in lymphocytes |
0.0 | 0.7 | PID RHOA PATHWAY | RhoA signaling pathway |
0.0 | 0.7 | PID DELTA NP63 PATHWAY | Validated transcriptional targets of deltaNp63 isoforms |
0.0 | 0.7 | PID CDC42 PATHWAY | CDC42 signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.5 | REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY | Genes involved in Nuclear Receptor transcription pathway |
0.0 | 2.5 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.0 | 1.8 | REACTOME GLYCOSPHINGOLIPID METABOLISM | Genes involved in Glycosphingolipid metabolism |
0.1 | 1.7 | REACTOME ACTIVATION OF THE AP1 FAMILY OF TRANSCRIPTION FACTORS | Genes involved in Activation of the AP-1 family of transcription factors |
0.1 | 1.5 | REACTOME INSULIN RECEPTOR RECYCLING | Genes involved in Insulin receptor recycling |
0.0 | 1.3 | REACTOME RAS ACTIVATION UOPN CA2 INFUX THROUGH NMDA RECEPTOR | Genes involved in Ras activation uopn Ca2+ infux through NMDA receptor |
0.1 | 1.2 | REACTOME SYNTHESIS OF PE | Genes involved in Synthesis of PE |
0.0 | 1.2 | REACTOME TRAF6 MEDIATED IRF7 ACTIVATION | Genes involved in TRAF6 mediated IRF7 activation |
0.0 | 0.9 | REACTOME NETRIN1 SIGNALING | Genes involved in Netrin-1 signaling |
0.2 | 0.8 | REACTOME OLFACTORY SIGNALING PATHWAY | Genes involved in Olfactory Signaling Pathway |