avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Nr4a3 | mm10_v2_chr4_+_48045144_48045160 | 0.15 | 3.8e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr9_-_46235260 Show fit | 3.19 |
ENSMUST00000121916.1
ENSMUST00000034586.2 |
apolipoprotein C-III |
|
chr10_-_127370535 Show fit | 2.26 |
ENSMUST00000026472.8
|
inhibin beta-C |
|
chr9_-_22002599 Show fit | 2.20 |
ENSMUST00000115336.2
ENSMUST00000044926.5 |
coiled-coil domain containing 151 |
|
chr2_+_68117713 Show fit | 1.95 |
ENSMUST00000112346.2
|
UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 |
|
chr9_-_46235631 Show fit | 1.93 |
ENSMUST00000118649.1
|
apolipoprotein C-III |
|
chr11_-_72266596 Show fit | 1.49 |
ENSMUST00000021161.6
ENSMUST00000140167.1 |
solute carrier family 13 (sodium-dependent citrate transporter), member 5 |
|
chr13_-_41847482 Show fit | 1.46 |
ENSMUST00000072012.3
|
androgen dependent TFPI regulating protein |
|
chr13_-_41847599 Show fit | 1.39 |
ENSMUST00000179758.1
|
androgen dependent TFPI regulating protein |
|
chr6_+_91157373 Show fit | 1.28 |
ENSMUST00000155007.1
|
histone deacetylase 11 |
|
chr9_-_70141484 Show fit | 1.27 |
ENSMUST00000034749.8
|
family with sequence similarity 81, member A |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.3 | 5.1 | GO:0010982 | regulation of high-density lipoprotein particle clearance(GO:0010982) |
0.1 | 3.0 | GO:0014003 | oligodendrocyte development(GO:0014003) |
0.0 | 2.3 | GO:0010862 | positive regulation of pathway-restricted SMAD protein phosphorylation(GO:0010862) |
0.2 | 2.2 | GO:0002862 | negative regulation of inflammatory response to antigenic stimulus(GO:0002862) |
0.1 | 2.2 | GO:0036158 | outer dynein arm assembly(GO:0036158) |
0.2 | 2.0 | GO:0006682 | galactosylceramide biosynthetic process(GO:0006682) galactolipid biosynthetic process(GO:0019375) |
0.4 | 1.5 | GO:0015744 | succinate transport(GO:0015744) |
0.0 | 1.4 | GO:0006487 | protein N-linked glycosylation(GO:0006487) |
0.3 | 1.3 | GO:1901097 | negative regulation of autophagosome maturation(GO:1901097) |
0.4 | 1.1 | GO:0071929 | alpha-tubulin acetylation(GO:0071929) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 5.1 | GO:0034363 | intermediate-density lipoprotein particle(GO:0034363) |
0.0 | 3.3 | GO:0036064 | ciliary basal body(GO:0036064) |
0.0 | 2.7 | GO:0000118 | histone deacetylase complex(GO:0000118) |
0.1 | 2.2 | GO:0061702 | inflammasome complex(GO:0061702) |
0.1 | 1.4 | GO:0072546 | ER membrane protein complex(GO:0072546) |
0.3 | 1.3 | GO:0036019 | endolysosome(GO:0036019) |
0.1 | 1.2 | GO:0008250 | oligosaccharyltransferase complex(GO:0008250) |
0.1 | 1.1 | GO:0097427 | microtubule bundle(GO:0097427) |
0.0 | 1.0 | GO:0016529 | sarcoplasmic reticulum(GO:0016529) |
0.1 | 0.8 | GO:0031983 | vesicle lumen(GO:0031983) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.3 | 5.1 | GO:0070653 | high-density lipoprotein particle receptor binding(GO:0070653) |
0.1 | 3.2 | GO:0031078 | histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041) |
0.0 | 2.3 | GO:0005160 | transforming growth factor beta receptor binding(GO:0005160) |
0.2 | 2.2 | GO:0005000 | vasopressin receptor activity(GO:0005000) |
0.5 | 2.0 | GO:0047275 | glucosaminylgalactosylglucosylceramide beta-galactosyltransferase activity(GO:0047275) |
0.2 | 1.7 | GO:0003847 | 1-alkyl-2-acetylglycerophosphocholine esterase activity(GO:0003847) |
0.5 | 1.5 | GO:0017153 | sodium:dicarboxylate symporter activity(GO:0017153) |
0.1 | 1.2 | GO:0004579 | oligosaccharyl transferase activity(GO:0004576) dolichyl-diphosphooligosaccharide-protein glycotransferase activity(GO:0004579) |
0.2 | 1.1 | GO:0016726 | xanthine dehydrogenase activity(GO:0004854) oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor(GO:0016726) |
0.2 | 1.1 | GO:0004468 | lysine N-acetyltransferase activity, acting on acetyl phosphate as donor(GO:0004468) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.7 | NABA SECRETED FACTORS | Genes encoding secreted soluble factors |
0.0 | 3.2 | PID HDAC CLASSII PATHWAY | Signaling events mediated by HDAC Class II |
0.0 | 1.3 | PID CMYB PATHWAY | C-MYB transcription factor network |
0.0 | 0.8 | PID IL5 PATHWAY | IL5-mediated signaling events |
0.0 | 0.4 | PID ARF 3PATHWAY | Arf1 pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 6.2 | REACTOME CHYLOMICRON MEDIATED LIPID TRANSPORT | Genes involved in Chylomicron-mediated lipid transport |
0.0 | 3.0 | REACTOME NOTCH1 INTRACELLULAR DOMAIN REGULATES TRANSCRIPTION | Genes involved in NOTCH1 Intracellular Domain Regulates Transcription |
0.3 | 2.3 | REACTOME GLYCOPROTEIN HORMONES | Genes involved in Glycoprotein hormones |
0.0 | 1.6 | REACTOME RESPIRATORY ELECTRON TRANSPORT | Genes involved in Respiratory electron transport |
0.1 | 1.5 | REACTOME BILE SALT AND ORGANIC ANION SLC TRANSPORTERS | Genes involved in Bile salt and organic anion SLC transporters |
0.0 | 1.2 | REACTOME ASPARAGINE N LINKED GLYCOSYLATION | Genes involved in Asparagine N-linked glycosylation |
0.1 | 1.1 | REACTOME PURINE CATABOLISM | Genes involved in Purine catabolism |
0.1 | 1.1 | REACTOME PROLACTIN RECEPTOR SIGNALING | Genes involved in Prolactin receptor signaling |
0.1 | 1.0 | REACTOME GAMMA CARBOXYLATION TRANSPORT AND AMINO TERMINAL CLEAVAGE OF PROTEINS | Genes involved in Gamma-carboxylation, transport, and amino-terminal cleavage of proteins |
0.0 | 0.7 | REACTOME PLATELET AGGREGATION PLUG FORMATION | Genes involved in Platelet Aggregation (Plug Formation) |