avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Nr6a1 | mm10_v2_chr2_-_38926217_38926454 | 0.13 | 4.4e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr3_+_107230608 Show fit | 4.46 |
ENSMUST00000179399.1
|
RIKEN cDNA A630076J17 gene |
|
chr16_+_22951072 Show fit | 3.26 |
ENSMUST00000023590.8
|
histidine-rich glycoprotein |
|
chr17_-_57228003 Show fit | 3.00 |
ENSMUST00000177046.1
ENSMUST00000024988.8 |
complement component 3 |
|
chr6_+_42245907 Show fit | 2.54 |
ENSMUST00000031897.5
|
glutathione S-transferase kappa 1 |
|
chr7_-_105600103 Show fit | 2.39 |
ENSMUST00000033185.8
|
hemopexin |
|
chr9_+_73101836 Show fit | 2.12 |
ENSMUST00000172578.1
|
KH domain containing 3, subcortical maternal complex member |
|
chr1_+_160978576 Show fit | 2.06 |
ENSMUST00000064725.5
|
serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1 |
|
chr6_-_124636085 Show fit | 1.85 |
ENSMUST00000068797.2
|
predicted gene 5077 |
|
chr9_-_119157055 Show fit | 1.85 |
ENSMUST00000010795.4
|
acetyl-Coenzyme A acyltransferase 1B |
|
chr5_+_92376954 Show fit | 1.66 |
ENSMUST00000120781.1
|
ADP-ribosyltransferase 3 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.1 | 5.6 | GO:0015886 | heme transport(GO:0015886) |
0.9 | 3.6 | GO:2000795 | negative regulation of epithelial cell proliferation involved in lung morphogenesis(GO:2000795) |
0.6 | 3.0 | GO:0001970 | positive regulation of activation of membrane attack complex(GO:0001970) |
0.1 | 2.6 | GO:0071173 | mitotic spindle assembly checkpoint(GO:0007094) spindle assembly checkpoint(GO:0071173) |
0.0 | 2.5 | GO:0006749 | glutathione metabolic process(GO:0006749) |
0.3 | 2.1 | GO:0007597 | blood coagulation, intrinsic pathway(GO:0007597) |
0.0 | 1.7 | GO:0006471 | protein ADP-ribosylation(GO:0006471) |
0.1 | 1.5 | GO:0001574 | ganglioside biosynthetic process(GO:0001574) |
0.3 | 1.4 | GO:0099527 | postsynapse to nucleus signaling pathway(GO:0099527) |
0.3 | 1.4 | GO:0006548 | histidine catabolic process(GO:0006548) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.7 | GO:0072562 | blood microparticle(GO:0072562) |
0.0 | 3.7 | GO:0005759 | mitochondrial matrix(GO:0005759) |
0.2 | 3.6 | GO:0044300 | cerebellar mossy fiber(GO:0044300) |
1.1 | 3.3 | GO:0032010 | phagolysosome(GO:0032010) |
0.2 | 2.6 | GO:0045179 | apical cortex(GO:0045179) |
0.0 | 1.4 | GO:0097440 | apical dendrite(GO:0097440) |
0.0 | 1.2 | GO:0005581 | collagen trimer(GO:0005581) |
0.0 | 1.1 | GO:0005811 | lipid particle(GO:0005811) |
0.1 | 1.0 | GO:0060091 | kinocilium(GO:0060091) |
0.0 | 0.9 | GO:0031307 | integral component of mitochondrial outer membrane(GO:0031307) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.4 | GO:0004866 | endopeptidase inhibitor activity(GO:0004866) endopeptidase regulator activity(GO:0061135) |
0.1 | 3.6 | GO:0001106 | RNA polymerase II transcription corepressor activity(GO:0001106) |
0.0 | 3.3 | GO:0004869 | cysteine-type endopeptidase inhibitor activity(GO:0004869) |
0.1 | 2.5 | GO:0015035 | protein disulfide oxidoreductase activity(GO:0015035) |
0.6 | 2.4 | GO:0015232 | heme transporter activity(GO:0015232) |
0.1 | 1.9 | GO:0003988 | acetyl-CoA C-acyltransferase activity(GO:0003988) |
0.1 | 1.7 | GO:0003956 | NAD(P)+-protein-arginine ADP-ribosyltransferase activity(GO:0003956) |
0.0 | 1.5 | GO:0016504 | peptidase activator activity(GO:0016504) |
0.0 | 1.4 | GO:0016836 | hydro-lyase activity(GO:0016836) |
0.0 | 1.4 | GO:0048306 | calcium-dependent protein binding(GO:0048306) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.0 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.1 | 3.6 | PID HNF3A PATHWAY | FOXA1 transcription factor network |
0.2 | 3.0 | PID ERB GENOMIC PATHWAY | Validated nuclear estrogen receptor beta network |
0.0 | 2.7 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.1 | 2.0 | PID GLYPICAN 1PATHWAY | Glypican 1 network |
0.0 | 1.2 | PID HDAC CLASSIII PATHWAY | Signaling events mediated by HDAC Class III |
0.0 | 1.1 | PID FOXO PATHWAY | FoxO family signaling |
0.0 | 0.9 | PID PDGFRA PATHWAY | PDGFR-alpha signaling pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.6 | REACTOME RNA POL III TRANSCRIPTION TERMINATION | Genes involved in RNA Polymerase III Transcription Termination |
0.0 | 3.3 | REACTOME RESPONSE TO ELEVATED PLATELET CYTOSOLIC CA2 | Genes involved in Response to elevated platelet cytosolic Ca2+ |
0.2 | 3.0 | REACTOME REGULATION OF COMPLEMENT CASCADE | Genes involved in Regulation of Complement cascade |
0.1 | 2.1 | REACTOME COMMON PATHWAY | Genes involved in Common Pathway |
0.0 | 1.5 | REACTOME COLLAGEN FORMATION | Genes involved in Collagen formation |
0.0 | 0.8 | REACTOME CITRIC ACID CYCLE TCA CYCLE | Genes involved in Citric acid cycle (TCA cycle) |
0.0 | 0.7 | REACTOME SYNTHESIS OF PA | Genes involved in Synthesis of PA |
0.0 | 0.6 | REACTOME KINESINS | Genes involved in Kinesins |
0.0 | 0.5 | REACTOME MITOCHONDRIAL PROTEIN IMPORT | Genes involved in Mitochondrial Protein Import |