avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Obox5 | mm10_v2_chr7_+_15750134_15750134 | -0.31 | 6.8e-02 | Click! |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 12.3 | GO:0060363 | cranial suture morphogenesis(GO:0060363) |
0.8 | 10.2 | GO:0034625 | fatty acid elongation, saturated fatty acid(GO:0019367) fatty acid elongation, unsaturated fatty acid(GO:0019368) fatty acid elongation, monounsaturated fatty acid(GO:0034625) fatty acid elongation, polyunsaturated fatty acid(GO:0034626) |
0.7 | 9.5 | GO:0015747 | urate transport(GO:0015747) |
2.3 | 9.4 | GO:0034034 | coenzyme A catabolic process(GO:0015938) nucleoside bisphosphate catabolic process(GO:0033869) ribonucleoside bisphosphate catabolic process(GO:0034031) purine nucleoside bisphosphate catabolic process(GO:0034034) |
1.1 | 7.6 | GO:0042904 | 9-cis-retinoic acid biosynthetic process(GO:0042904) 9-cis-retinoic acid metabolic process(GO:0042905) |
1.2 | 7.1 | GO:1902847 | regulation of neuronal signal transduction(GO:1902847) positive regulation of neurofibrillary tangle assembly(GO:1902998) |
0.6 | 7.1 | GO:0043651 | linoleic acid metabolic process(GO:0043651) |
0.2 | 6.1 | GO:0019373 | epoxygenase P450 pathway(GO:0019373) |
0.6 | 5.4 | GO:0045919 | positive regulation of cytolysis(GO:0045919) |
1.0 | 5.2 | GO:0014016 | neuroblast differentiation(GO:0014016) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 17.4 | GO:0042579 | peroxisome(GO:0005777) microbody(GO:0042579) |
0.0 | 16.8 | GO:0005783 | endoplasmic reticulum(GO:0005783) |
0.1 | 14.7 | GO:0030176 | integral component of endoplasmic reticulum membrane(GO:0030176) |
0.2 | 13.2 | GO:0005788 | endoplasmic reticulum lumen(GO:0005788) |
1.4 | 11.6 | GO:0032937 | SREBP-SCAP-Insig complex(GO:0032937) |
0.8 | 10.3 | GO:0097418 | neurofibrillary tangle(GO:0097418) |
0.0 | 4.0 | GO:0005578 | proteinaceous extracellular matrix(GO:0005578) |
0.2 | 2.2 | GO:0045275 | respiratory chain complex III(GO:0045275) |
0.0 | 2.1 | GO:0031901 | early endosome membrane(GO:0031901) |
0.3 | 2.0 | GO:0005958 | DNA-dependent protein kinase-DNA ligase 4 complex(GO:0005958) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 13.8 | GO:0015020 | glucuronosyltransferase activity(GO:0015020) |
0.8 | 10.2 | GO:0102337 | fatty acid elongase activity(GO:0009922) 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338) |
0.7 | 10.2 | GO:1901702 | urate transmembrane transporter activity(GO:0015143) salt transmembrane transporter activity(GO:1901702) |
1.9 | 9.4 | GO:0003986 | acetyl-CoA hydrolase activity(GO:0003986) |
0.1 | 8.2 | GO:0008170 | N-methyltransferase activity(GO:0008170) |
0.3 | 7.7 | GO:0051787 | misfolded protein binding(GO:0051787) |
0.3 | 7.6 | GO:0004745 | retinol dehydrogenase activity(GO:0004745) |
1.8 | 7.1 | GO:0071614 | linoleic acid epoxygenase activity(GO:0071614) |
0.2 | 5.6 | GO:0008392 | arachidonic acid epoxygenase activity(GO:0008392) |
1.3 | 5.2 | GO:0004104 | cholinesterase activity(GO:0004104) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 7.1 | PID MYC REPRESS PATHWAY | Validated targets of C-MYC transcriptional repression |
0.1 | 4.0 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.2 | 3.2 | PID P38 GAMMA DELTA PATHWAY | Signaling mediated by p38-gamma and p38-delta |
0.0 | 2.7 | PID P75 NTR PATHWAY | p75(NTR)-mediated signaling |
0.0 | 2.6 | PID ERA GENOMIC PATHWAY | Validated nuclear estrogen receptor alpha network |
0.1 | 2.0 | PID RHODOPSIN PATHWAY | Visual signal transduction: Rods |
0.1 | 1.7 | PID DNA PK PATHWAY | DNA-PK pathway in nonhomologous end joining |
0.0 | 1.4 | SIG PIP3 SIGNALING IN CARDIAC MYOCTES | Genes related to PIP3 signaling in cardiac myocytes |
0.0 | 1.2 | PID ARF6 TRAFFICKING PATHWAY | Arf6 trafficking events |
0.1 | 1.0 | PID ERBB NETWORK PATHWAY | ErbB receptor signaling network |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 10.2 | REACTOME SYNTHESIS OF VERY LONG CHAIN FATTY ACYL COAS | Genes involved in Synthesis of very long-chain fatty acyl-CoAs |
0.1 | 9.9 | REACTOME PHASE II CONJUGATION | Genes involved in Phase II conjugation |
0.1 | 6.1 | REACTOME RESPONSE TO ELEVATED PLATELET CYTOSOLIC CA2 | Genes involved in Response to elevated platelet cytosolic Ca2+ |
0.3 | 6.0 | REACTOME SYNTHESIS SECRETION AND DEACYLATION OF GHRELIN | Genes involved in Synthesis, Secretion, and Deacylation of Ghrelin |
0.0 | 3.3 | REACTOME RESPIRATORY ELECTRON TRANSPORT | Genes involved in Respiratory electron transport |
0.1 | 3.2 | REACTOME CASPASE MEDIATED CLEAVAGE OF CYTOSKELETAL PROTEINS | Genes involved in Caspase-mediated cleavage of cytoskeletal proteins |
0.2 | 2.6 | REACTOME ALPHA LINOLENIC ACID ALA METABOLISM | Genes involved in alpha-linolenic acid (ALA) metabolism |
0.1 | 1.9 | REACTOME PRESYNAPTIC NICOTINIC ACETYLCHOLINE RECEPTORS | Genes involved in Presynaptic nicotinic acetylcholine receptors |
0.2 | 1.8 | REACTOME RECYCLING OF BILE ACIDS AND SALTS | Genes involved in Recycling of bile acids and salts |
0.1 | 1.8 | REACTOME CYTOSOLIC SULFONATION OF SMALL MOLECULES | Genes involved in Cytosolic sulfonation of small molecules |