avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Olig2 | mm10_v2_chr16_+_91225550_91225579 | -0.37 | 2.5e-02 | Click! |
Olig3 | mm10_v2_chr10_+_19356558_19356565 | -0.29 | 9.0e-02 | Click! |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.4 | 16.5 | GO:0042905 | 9-cis-retinoic acid biosynthetic process(GO:0042904) 9-cis-retinoic acid metabolic process(GO:0042905) |
0.8 | 13.0 | GO:0052695 | cellular glucuronidation(GO:0052695) |
0.0 | 11.8 | GO:0010466 | negative regulation of peptidase activity(GO:0010466) |
0.4 | 11.5 | GO:0015721 | bile acid and bile salt transport(GO:0015721) |
1.9 | 11.2 | GO:1904075 | regulation of trophectodermal cell proliferation(GO:1904073) positive regulation of trophectodermal cell proliferation(GO:1904075) |
0.1 | 8.9 | GO:0007566 | embryo implantation(GO:0007566) |
1.9 | 7.4 | GO:0042851 | L-alanine metabolic process(GO:0042851) |
0.5 | 6.9 | GO:0006957 | complement activation, alternative pathway(GO:0006957) |
0.7 | 6.7 | GO:0019227 | neuronal action potential propagation(GO:0019227) action potential propagation(GO:0098870) |
1.6 | 6.3 | GO:2001106 | regulation of Rho guanyl-nucleotide exchange factor activity(GO:2001106) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.6 | 14.5 | GO:0042567 | insulin-like growth factor ternary complex(GO:0042567) |
0.2 | 10.5 | GO:0000800 | lateral element(GO:0000800) |
0.0 | 9.8 | GO:0005743 | mitochondrial inner membrane(GO:0005743) |
0.1 | 7.3 | GO:0000502 | proteasome complex(GO:0000502) |
0.6 | 6.9 | GO:0005579 | membrane attack complex(GO:0005579) |
0.1 | 5.9 | GO:0005891 | voltage-gated calcium channel complex(GO:0005891) |
0.1 | 5.4 | GO:0046658 | anchored component of plasma membrane(GO:0046658) |
0.0 | 4.7 | GO:0005811 | lipid particle(GO:0005811) |
0.2 | 4.4 | GO:0071564 | npBAF complex(GO:0071564) |
0.2 | 4.1 | GO:0005751 | mitochondrial respiratory chain complex IV(GO:0005751) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.9 | 33.9 | GO:0015020 | glucuronosyltransferase activity(GO:0015020) |
0.2 | 24.7 | GO:0004867 | serine-type endopeptidase inhibitor activity(GO:0004867) |
6.8 | 20.3 | GO:0018479 | benzaldehyde dehydrogenase (NAD+) activity(GO:0018479) |
0.3 | 11.2 | GO:0043539 | protein serine/threonine kinase activator activity(GO:0043539) |
0.0 | 8.9 | GO:0004842 | ubiquitin-protein transferase activity(GO:0004842) |
0.2 | 7.8 | GO:0004364 | glutathione transferase activity(GO:0004364) |
0.1 | 7.8 | GO:0052689 | carboxylic ester hydrolase activity(GO:0052689) |
0.0 | 7.6 | GO:0001078 | transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001078) |
1.1 | 7.4 | GO:0008508 | bile acid:sodium symporter activity(GO:0008508) |
0.3 | 7.4 | GO:0008483 | transaminase activity(GO:0008483) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 11.5 | PID IGF1 PATHWAY | IGF1 pathway |
0.1 | 8.7 | PID AR TF PATHWAY | Regulation of Androgen receptor activity |
0.0 | 4.1 | PID HIF1 TFPATHWAY | HIF-1-alpha transcription factor network |
0.1 | 3.6 | PID INTEGRIN3 PATHWAY | Beta3 integrin cell surface interactions |
0.0 | 3.1 | PID LKB1 PATHWAY | LKB1 signaling events |
0.1 | 2.5 | PID GLYPICAN 1PATHWAY | Glypican 1 network |
0.0 | 2.5 | PID ATF2 PATHWAY | ATF-2 transcription factor network |
0.1 | 2.3 | PID NEPHRIN NEPH1 PATHWAY | Nephrin/Neph1 signaling in the kidney podocyte |
0.0 | 2.0 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.1 | 1.9 | PID WNT NONCANONICAL PATHWAY | Noncanonical Wnt signaling pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.7 | 16.5 | REACTOME ETHANOL OXIDATION | Genes involved in Ethanol oxidation |
1.2 | 10.4 | REACTOME RECYCLING OF BILE ACIDS AND SALTS | Genes involved in Recycling of bile acids and salts |
0.1 | 8.2 | REACTOME PHASE II CONJUGATION | Genes involved in Phase II conjugation |
0.0 | 7.6 | REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES | Genes involved in Metabolism of amino acids and derivatives |
0.5 | 5.8 | REACTOME SYNTHESIS OF BILE ACIDS AND BILE SALTS VIA 24 HYDROXYCHOLESTEROL | Genes involved in Synthesis of bile acids and bile salts via 24-hydroxycholesterol |
0.2 | 5.8 | REACTOME COMPLEMENT CASCADE | Genes involved in Complement cascade |
0.2 | 5.5 | REACTOME AMINO ACID SYNTHESIS AND INTERCONVERSION TRANSAMINATION | Genes involved in Amino acid synthesis and interconversion (transamination) |
0.1 | 4.6 | REACTOME IRON UPTAKE AND TRANSPORT | Genes involved in Iron uptake and transport |
0.1 | 4.0 | REACTOME PTM GAMMA CARBOXYLATION HYPUSINE FORMATION AND ARYLSULFATASE ACTIVATION | Genes involved in PTM: gamma carboxylation, hypusine formation and arylsulfatase activation |
0.3 | 3.8 | REACTOME REGULATION OF RHEB GTPASE ACTIVITY BY AMPK | Genes involved in Regulation of Rheb GTPase activity by AMPK |