avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Onecut1 | mm10_v2_chr9_+_74861888_74861921 | 0.45 | 6.4e-03 | Click! |
Cux2 | mm10_v2_chr5_-_122049822_122049882 | -0.29 | 8.2e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr15_-_60921270 Show fit | 10.50 |
ENSMUST00000096418.3
|
alpha-1-B glycoprotein |
|
chr16_+_22951072 Show fit | 7.89 |
ENSMUST00000023590.8
|
histidine-rich glycoprotein |
|
chr7_+_44207307 Show fit | 5.93 |
ENSMUST00000077354.4
|
kallikrein 1-related pepidase b4 |
|
chr4_-_104876383 Show fit | 5.77 |
ENSMUST00000064873.8
ENSMUST00000106808.3 ENSMUST00000048947.8 |
complement component 8, alpha polypeptide |
|
chr6_+_121346618 Show fit | 5.67 |
ENSMUST00000032200.9
|
solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12 |
|
chr6_-_23132981 Show fit | 4.34 |
ENSMUST00000031707.7
|
aminoadipate-semialdehyde synthase |
|
chr4_-_46991842 Show fit | 4.20 |
ENSMUST00000107749.2
|
gamma-aminobutyric acid (GABA) B receptor, 2 |
|
chr2_-_148040196 Show fit | 3.75 |
ENSMUST00000136555.1
|
RIKEN cDNA 9030622O22 gene |
|
chr2_-_84775420 Show fit | 3.38 |
ENSMUST00000111641.1
|
serine (or cysteine) peptidase inhibitor, clade G, member 1 |
|
chr2_-_84775388 Show fit | 3.34 |
ENSMUST00000023994.3
|
serine (or cysteine) peptidase inhibitor, clade G, member 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.6 | 7.9 | GO:0034395 | regulation of transcription from RNA polymerase II promoter in response to iron(GO:0034395) |
2.2 | 6.7 | GO:0001868 | regulation of complement activation, lectin pathway(GO:0001868) negative regulation of complement activation, lectin pathway(GO:0001869) |
0.2 | 5.9 | GO:0043552 | positive regulation of phosphatidylinositol 3-kinase activity(GO:0043552) |
0.4 | 5.8 | GO:0006957 | complement activation, alternative pathway(GO:0006957) |
1.4 | 5.7 | GO:0009992 | cellular water homeostasis(GO:0009992) |
1.4 | 4.3 | GO:0006553 | lysine metabolic process(GO:0006553) |
0.1 | 4.2 | GO:0007214 | gamma-aminobutyric acid signaling pathway(GO:0007214) |
0.5 | 3.2 | GO:0015712 | hexose phosphate transport(GO:0015712) glucose-6-phosphate transport(GO:0015760) |
0.3 | 3.2 | GO:0018298 | protein-chromophore linkage(GO:0018298) |
0.2 | 3.2 | GO:0045792 | negative regulation of cell size(GO:0045792) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 21.7 | GO:0072562 | blood microparticle(GO:0072562) |
2.6 | 7.9 | GO:0032010 | phagolysosome(GO:0032010) |
0.5 | 5.8 | GO:0005579 | membrane attack complex(GO:0005579) |
0.0 | 4.7 | GO:0031526 | brush border membrane(GO:0031526) |
0.8 | 4.2 | GO:0038039 | G-protein coupled receptor heterodimeric complex(GO:0038039) |
0.0 | 3.8 | GO:0042579 | peroxisome(GO:0005777) microbody(GO:0042579) |
0.0 | 3.2 | GO:0001725 | stress fiber(GO:0001725) contractile actin filament bundle(GO:0097517) |
0.0 | 3.2 | GO:0030176 | integral component of endoplasmic reticulum membrane(GO:0030176) |
0.0 | 2.7 | GO:0030175 | filopodium(GO:0030175) |
0.4 | 2.6 | GO:0048237 | rough endoplasmic reticulum lumen(GO:0048237) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 15.1 | GO:0001848 | complement binding(GO:0001848) |
0.1 | 7.9 | GO:0004869 | cysteine-type endopeptidase inhibitor activity(GO:0004869) |
0.1 | 6.1 | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides(GO:0016811) |
0.9 | 5.7 | GO:0005332 | gamma-aminobutyric acid:sodium symporter activity(GO:0005332) |
0.2 | 4.3 | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor(GO:0016646) |
0.7 | 4.2 | GO:0004965 | G-protein coupled GABA receptor activity(GO:0004965) |
1.1 | 3.2 | GO:0050309 | glucose-6-phosphatase activity(GO:0004346) sugar-terminal-phosphatase activity(GO:0050309) |
0.2 | 3.2 | GO:0019865 | immunoglobulin binding(GO:0019865) |
0.0 | 3.2 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.6 | 3.0 | GO:0055056 | dehydroascorbic acid transporter activity(GO:0033300) D-glucose transmembrane transporter activity(GO:0055056) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 21.1 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.2 | 10.5 | ST PHOSPHOINOSITIDE 3 KINASE PATHWAY | PI3K Pathway |
0.1 | 9.1 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.0 | 2.7 | PID IL6 7 PATHWAY | IL6-mediated signaling events |
0.1 | 2.5 | PID INTEGRIN5 PATHWAY | Beta5 beta6 beta7 and beta8 integrin cell surface interactions |
0.0 | 2.4 | PID CASPASE PATHWAY | Caspase cascade in apoptosis |
0.0 | 2.3 | PID MTOR 4PATHWAY | mTOR signaling pathway |
0.0 | 2.1 | PID RXR VDR PATHWAY | RXR and RAR heterodimerization with other nuclear receptor |
0.1 | 2.0 | SIG INSULIN RECEPTOR PATHWAY IN CARDIAC MYOCYTES | Genes related to the insulin receptor pathway |
0.0 | 1.4 | PID AR TF PATHWAY | Regulation of Androgen receptor activity |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 7.5 | REACTOME RESPONSE TO ELEVATED PLATELET CYTOSOLIC CA2 | Genes involved in Response to elevated platelet cytosolic Ca2+ |
0.3 | 6.7 | REACTOME INTRINSIC PATHWAY | Genes involved in Intrinsic Pathway |
0.2 | 5.8 | REACTOME COMPLEMENT CASCADE | Genes involved in Complement cascade |
0.2 | 5.7 | REACTOME GABA SYNTHESIS RELEASE REUPTAKE AND DEGRADATION | Genes involved in GABA synthesis, release, reuptake and degradation |
0.1 | 4.7 | REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY | Genes involved in Nuclear Receptor transcription pathway |
0.0 | 4.3 | REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES | Genes involved in Metabolism of amino acids and derivatives |
0.2 | 4.2 | REACTOME CLASS C 3 METABOTROPIC GLUTAMATE PHEROMONE RECEPTORS | Genes involved in Class C/3 (Metabotropic glutamate/pheromone receptors) |
0.1 | 3.8 | REACTOME DCC MEDIATED ATTRACTIVE SIGNALING | Genes involved in DCC mediated attractive signaling |
0.1 | 3.4 | REACTOME CASPASE MEDIATED CLEAVAGE OF CYTOSKELETAL PROTEINS | Genes involved in Caspase-mediated cleavage of cytoskeletal proteins |
0.1 | 3.2 | REACTOME GLUCOSE TRANSPORT | Genes involved in Glucose transport |