avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Otx1 | mm10_v2_chr11_-_22001605_22001631 | -0.09 | 6.1e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr15_-_60921270 Show fit | 7.38 |
ENSMUST00000096418.3
|
alpha-1-B glycoprotein |
|
chr14_+_37068042 Show fit | 6.00 |
ENSMUST00000057176.3
|
leucine-rich repeat, immunoglobulin-like and transmembrane domains 2 |
|
chr10_+_127801145 Show fit | 5.96 |
ENSMUST00000071646.1
|
retinol dehydrogenase 16 |
|
chr13_+_4436094 Show fit | 3.29 |
ENSMUST00000156277.1
|
aldo-keto reductase family 1, member C6 |
|
chr16_-_46010212 Show fit | 3.17 |
ENSMUST00000130481.1
|
phosphatidylinositol-specific phospholipase C, X domain containing 2 |
|
chr7_-_100662414 Show fit | 3.07 |
ENSMUST00000079176.6
|
pleckstrin homology domain containing, family B (evectins) member 1 |
|
chr7_-_100662315 Show fit | 3.04 |
ENSMUST00000151123.1
ENSMUST00000107047.2 |
pleckstrin homology domain containing, family B (evectins) member 1 |
|
chr11_-_120453473 Show fit | 2.87 |
ENSMUST00000026452.2
|
phosphodiesterase 6G, cGMP-specific, rod, gamma |
|
chr5_-_87092546 Show fit | 2.77 |
ENSMUST00000132667.1
ENSMUST00000145617.1 ENSMUST00000094649.4 |
UDP glucuronosyltransferase 2 family, polypeptide B36 |
|
chr5_+_87000838 Show fit | 2.73 |
ENSMUST00000031186.7
|
UDP glucuronosyltransferase 2 family, polypeptide B35 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.9 | 6.0 | GO:0042904 | 9-cis-retinoic acid biosynthetic process(GO:0042904) 9-cis-retinoic acid metabolic process(GO:0042905) |
1.1 | 3.3 | GO:0071395 | response to jasmonic acid(GO:0009753) cellular response to jasmonic acid stimulus(GO:0071395) |
0.1 | 2.9 | GO:0045742 | positive regulation of epidermal growth factor receptor signaling pathway(GO:0045742) |
0.0 | 2.3 | GO:0007608 | sensory perception of smell(GO:0007608) |
0.4 | 1.8 | GO:0090472 | dibasic protein processing(GO:0090472) |
0.1 | 1.7 | GO:0050872 | white fat cell differentiation(GO:0050872) |
0.0 | 1.6 | GO:0006635 | fatty acid beta-oxidation(GO:0006635) |
0.1 | 1.4 | GO:0035814 | negative regulation of renal sodium excretion(GO:0035814) |
0.1 | 1.4 | GO:0006120 | mitochondrial electron transport, NADH to ubiquinone(GO:0006120) |
0.1 | 1.3 | GO:0090503 | RNA phosphodiester bond hydrolysis, exonucleolytic(GO:0090503) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 7.4 | GO:0072562 | blood microparticle(GO:0072562) |
0.1 | 6.0 | GO:0005788 | endoplasmic reticulum lumen(GO:0005788) |
0.1 | 6.0 | GO:0001750 | photoreceptor outer segment(GO:0001750) |
0.1 | 1.8 | GO:0012510 | trans-Golgi network transport vesicle membrane(GO:0012510) |
0.0 | 1.7 | GO:0070469 | respiratory chain(GO:0070469) |
0.0 | 1.5 | GO:0005791 | rough endoplasmic reticulum(GO:0005791) |
0.1 | 1.4 | GO:0031983 | vesicle lumen(GO:0031983) |
0.1 | 1.3 | GO:0000177 | cytoplasmic exosome (RNase complex)(GO:0000177) |
0.0 | 0.9 | GO:0005793 | endoplasmic reticulum-Golgi intermediate compartment(GO:0005793) |
0.1 | 0.8 | GO:0000276 | mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)(GO:0000276) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 7.2 | GO:0015020 | glucuronosyltransferase activity(GO:0015020) |
0.3 | 6.0 | GO:0004745 | retinol dehydrogenase activity(GO:0004745) |
0.0 | 4.9 | GO:0008022 | protein C-terminus binding(GO:0008022) |
1.1 | 3.3 | GO:0047006 | 17-alpha,20-alpha-dihydroxypregn-4-en-3-one dehydrogenase activity(GO:0047006) |
0.0 | 3.2 | GO:0008081 | phosphoric diester hydrolase activity(GO:0008081) |
0.1 | 2.9 | GO:0047555 | 3',5'-cyclic-GMP phosphodiesterase activity(GO:0047555) |
0.0 | 2.6 | GO:0005516 | calmodulin binding(GO:0005516) |
0.0 | 2.0 | GO:0005549 | odorant binding(GO:0005549) |
0.5 | 1.9 | GO:0004427 | inorganic diphosphatase activity(GO:0004427) |
0.0 | 1.9 | GO:0008536 | Ran GTPase binding(GO:0008536) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 7.4 | ST PHOSPHOINOSITIDE 3 KINASE PATHWAY | PI3K Pathway |
0.1 | 2.9 | ST WNT CA2 CYCLIC GMP PATHWAY | Wnt/Ca2+/cyclic GMP signaling. |
0.0 | 2.5 | PID HIF1 TFPATHWAY | HIF-1-alpha transcription factor network |
0.0 | 1.7 | SIG PIP3 SIGNALING IN CARDIAC MYOCTES | Genes related to PIP3 signaling in cardiac myocytes |
0.0 | 0.7 | PID CERAMIDE PATHWAY | Ceramide signaling pathway |
0.0 | 0.6 | ST INTERLEUKIN 4 PATHWAY | Interleukin 4 (IL-4) Pathway |
0.0 | 0.6 | ST G ALPHA S PATHWAY | G alpha s Pathway |
0.0 | 0.5 | PID ARF6 PATHWAY | Arf6 signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 2.9 | REACTOME CGMP EFFECTS | Genes involved in cGMP effects |
0.1 | 1.9 | REACTOME CYTOSOLIC TRNA AMINOACYLATION | Genes involved in Cytosolic tRNA aminoacylation |
0.1 | 1.8 | REACTOME GAMMA CARBOXYLATION TRANSPORT AND AMINO TERMINAL CLEAVAGE OF PROTEINS | Genes involved in Gamma-carboxylation, transport, and amino-terminal cleavage of proteins |
0.0 | 1.7 | REACTOME INTERFERON ALPHA BETA SIGNALING | Genes involved in Interferon alpha/beta signaling |
0.1 | 1.0 | REACTOME THE ACTIVATION OF ARYLSULFATASES | Genes involved in The activation of arylsulfatases |
0.0 | 1.0 | REACTOME DEADENYLATION OF MRNA | Genes involved in Deadenylation of mRNA |
0.0 | 0.8 | REACTOME FORMATION OF ATP BY CHEMIOSMOTIC COUPLING | Genes involved in Formation of ATP by chemiosmotic coupling |
0.0 | 0.8 | REACTOME PACKAGING OF TELOMERE ENDS | Genes involved in Packaging Of Telomere Ends |
0.0 | 0.7 | REACTOME ACYL CHAIN REMODELLING OF PS | Genes involved in Acyl chain remodelling of PS |
0.0 | 0.7 | REACTOME CIRCADIAN REPRESSION OF EXPRESSION BY REV ERBA | Genes involved in Circadian Repression of Expression by REV-ERBA |