avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Pax2 | mm10_v2_chr19_+_44757394_44757394 | -0.27 | 1.1e-01 | Click! |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 12.3 | GO:0008643 | carbohydrate transport(GO:0008643) |
0.6 | 5.9 | GO:0016554 | cytidine to uridine editing(GO:0016554) |
1.9 | 5.7 | GO:0019859 | pyrimidine nucleobase catabolic process(GO:0006208) thymine catabolic process(GO:0006210) thymine metabolic process(GO:0019859) |
1.1 | 5.6 | GO:1904721 | regulation of mRNA cleavage(GO:0031437) negative regulation of mRNA cleavage(GO:0031438) regulation of mRNA endonucleolytic cleavage involved in unfolded protein response(GO:1904720) negative regulation of mRNA endonucleolytic cleavage involved in unfolded protein response(GO:1904721) |
0.8 | 4.8 | GO:0044375 | regulation of peroxisome size(GO:0044375) |
0.5 | 4.6 | GO:0061727 | methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione(GO:0019243) methylglyoxal catabolic process(GO:0051596) methylglyoxal catabolic process to lactate(GO:0061727) |
0.2 | 4.4 | GO:0048642 | negative regulation of skeletal muscle tissue development(GO:0048642) |
0.1 | 4.2 | GO:0001958 | endochondral ossification(GO:0001958) replacement ossification(GO:0036075) |
0.4 | 4.1 | GO:0051256 | mitotic spindle midzone assembly(GO:0051256) positive regulation of ubiquitin protein ligase activity(GO:1904668) |
0.8 | 3.9 | GO:0090038 | negative regulation of protein kinase C signaling(GO:0090038) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 12.5 | GO:0080008 | Cul4-RING E3 ubiquitin ligase complex(GO:0080008) |
0.0 | 10.9 | GO:0000139 | Golgi membrane(GO:0000139) |
0.0 | 6.7 | GO:0005789 | endoplasmic reticulum membrane(GO:0005789) |
0.0 | 6.2 | GO:0005938 | cell cortex(GO:0005938) |
0.1 | 5.8 | GO:0005776 | autophagosome(GO:0005776) |
0.0 | 5.5 | GO:0005759 | mitochondrial matrix(GO:0005759) |
0.0 | 4.9 | GO:0031965 | nuclear membrane(GO:0031965) |
0.2 | 4.8 | GO:0005779 | integral component of peroxisomal membrane(GO:0005779) |
0.0 | 4.2 | GO:0009925 | basal plasma membrane(GO:0009925) |
0.4 | 3.9 | GO:0033180 | proton-transporting V-type ATPase, V1 domain(GO:0033180) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 10.5 | GO:0005351 | sugar:proton symporter activity(GO:0005351) |
0.0 | 6.5 | GO:0001228 | transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228) |
0.1 | 5.7 | GO:0016790 | thiolester hydrolase activity(GO:0016790) |
0.9 | 5.6 | GO:0060698 | endoribonuclease inhibitor activity(GO:0060698) |
0.1 | 5.5 | GO:0030332 | cyclin binding(GO:0030332) |
0.0 | 5.0 | GO:0043130 | ubiquitin binding(GO:0043130) |
0.0 | 4.7 | GO:0008565 | protein transporter activity(GO:0008565) |
0.5 | 4.6 | GO:0004416 | hydroxyacylglutathione hydrolase activity(GO:0004416) |
0.1 | 4.1 | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity(GO:0008138) |
0.9 | 3.7 | GO:0005008 | hepatocyte growth factor-activated receptor activity(GO:0005008) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 5.1 | PID LKB1 PATHWAY | LKB1 signaling events |
0.1 | 3.7 | PID ARF6 PATHWAY | Arf6 signaling events |
0.1 | 3.5 | ST G ALPHA S PATHWAY | G alpha s Pathway |
0.0 | 3.0 | PID FGF PATHWAY | FGF signaling pathway |
0.0 | 2.7 | PID AP1 PATHWAY | AP-1 transcription factor network |
0.1 | 2.2 | PID INSULIN GLUCOSE PATHWAY | Insulin-mediated glucose transport |
0.1 | 1.6 | PID WNT CANONICAL PATHWAY | Canonical Wnt signaling pathway |
0.0 | 1.3 | PID ERBB2 ERBB3 PATHWAY | ErbB2/ErbB3 signaling events |
0.0 | 1.3 | PID P73PATHWAY | p73 transcription factor network |
0.0 | 1.2 | PID HIF2PATHWAY | HIF-2-alpha transcription factor network |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 5.7 | REACTOME BRANCHED CHAIN AMINO ACID CATABOLISM | Genes involved in Branched-chain amino acid catabolism |
0.0 | 4.5 | REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY | Genes involved in Nuclear Receptor transcription pathway |
0.3 | 3.9 | REACTOME NEGATIVE REGULATION OF THE PI3K AKT NETWORK | Genes involved in Negative regulation of the PI3K/AKT network |
0.1 | 3.7 | REACTOME SEMA4D IN SEMAPHORIN SIGNALING | Genes involved in Sema4D in semaphorin signaling |
0.1 | 3.4 | REACTOME INSULIN RECEPTOR RECYCLING | Genes involved in Insulin receptor recycling |
0.1 | 3.3 | REACTOME RAS ACTIVATION UOPN CA2 INFUX THROUGH NMDA RECEPTOR | Genes involved in Ras activation uopn Ca2+ infux through NMDA receptor |
0.1 | 3.2 | REACTOME GLYCOSPHINGOLIPID METABOLISM | Genes involved in Glycosphingolipid metabolism |
0.2 | 3.0 | REACTOME CALNEXIN CALRETICULIN CYCLE | Genes involved in Calnexin/calreticulin cycle |
0.2 | 3.0 | REACTOME FGFR2C LIGAND BINDING AND ACTIVATION | Genes involved in FGFR2c ligand binding and activation |
0.2 | 2.5 | REACTOME VITAMIN B5 PANTOTHENATE METABOLISM | Genes involved in Vitamin B5 (pantothenate) metabolism |