avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Pax5 | mm10_v2_chr4_-_44711446_44711446 | 0.41 | 1.3e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr7_-_142679533 Show fit | 12.72 |
ENSMUST00000162317.1
ENSMUST00000125933.1 ENSMUST00000105931.1 ENSMUST00000105930.1 ENSMUST00000105933.1 ENSMUST00000105932.1 ENSMUST00000000220.2 |
insulin II |
|
chr19_+_52264323 Show fit | 12.46 |
ENSMUST00000039652.4
|
insulin I |
|
chr6_+_30541582 Show fit | 5.52 |
ENSMUST00000096066.4
|
carboxypeptidase A2, pancreatic |
|
chr11_-_102107822 Show fit | 5.28 |
ENSMUST00000177304.1
ENSMUST00000017455.8 |
peptide YY |
|
chr16_-_23890805 Show fit | 4.31 |
ENSMUST00000004480.3
|
somatostatin |
|
chr17_-_26199008 Show fit | 3.83 |
ENSMUST00000142410.1
ENSMUST00000120333.1 ENSMUST00000039113.7 |
protein disulfide isomerase associated 2 |
|
chr7_+_131032061 Show fit | 3.04 |
ENSMUST00000084509.3
|
deleted in malignant brain tumors 1 |
|
chr6_-_83536215 Show fit | 2.47 |
ENSMUST00000075161.5
|
actin, gamma 2, smooth muscle, enteric |
|
chr9_+_46269069 Show fit | 2.42 |
ENSMUST00000034584.3
|
apolipoprotein A-V |
|
chr1_-_79440039 Show fit | 2.23 |
ENSMUST00000049972.4
|
secretogranin II |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
4.2 | 12.7 | GO:1990535 | negative regulation of NAD(P)H oxidase activity(GO:0033861) neuron projection maintenance(GO:1990535) |
0.1 | 11.8 | GO:0015758 | glucose transport(GO:0015758) |
0.3 | 5.4 | GO:0032096 | negative regulation of response to food(GO:0032096) |
0.1 | 3.9 | GO:0006910 | phagocytosis, recognition(GO:0006910) |
0.1 | 3.6 | GO:0015701 | bicarbonate transport(GO:0015701) |
0.2 | 3.5 | GO:0001833 | inner cell mass cell proliferation(GO:0001833) |
0.2 | 2.9 | GO:0060087 | relaxation of vascular smooth muscle(GO:0060087) |
0.1 | 2.8 | GO:0003009 | skeletal muscle contraction(GO:0003009) |
0.5 | 2.2 | GO:0010901 | regulation of very-low-density lipoprotein particle remodeling(GO:0010901) |
0.1 | 2.1 | GO:0006883 | cellular sodium ion homeostasis(GO:0006883) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 18.1 | GO:0005615 | extracellular space(GO:0005615) |
0.5 | 12.5 | GO:0005732 | small nucleolar ribonucleoprotein complex(GO:0005732) |
0.0 | 9.5 | GO:0030141 | secretory granule(GO:0030141) |
0.0 | 6.6 | GO:0016323 | basolateral plasma membrane(GO:0016323) |
0.0 | 6.1 | GO:0005578 | proteinaceous extracellular matrix(GO:0005578) |
0.0 | 5.9 | GO:0005604 | basement membrane(GO:0005604) |
0.0 | 3.6 | GO:0016324 | apical plasma membrane(GO:0016324) |
0.2 | 3.5 | GO:0042571 | immunoglobulin complex, circulating(GO:0042571) |
0.0 | 3.3 | GO:0016529 | sarcoplasmic reticulum(GO:0016529) |
0.0 | 3.2 | GO:0030017 | sarcomere(GO:0030017) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 24.2 | GO:0005158 | insulin receptor binding(GO:0005158) |
0.2 | 6.2 | GO:0004181 | metallocarboxypeptidase activity(GO:0004181) |
0.2 | 5.6 | GO:0005184 | neuropeptide hormone activity(GO:0005184) |
0.1 | 4.9 | GO:0005044 | scavenger receptor activity(GO:0005044) |
0.0 | 4.2 | GO:0030695 | GTPase regulator activity(GO:0030695) |
0.2 | 3.9 | GO:0008510 | sodium:bicarbonate symporter activity(GO:0008510) |
0.3 | 3.7 | GO:0031545 | peptidyl-proline 4-dioxygenase activity(GO:0031545) |
0.2 | 3.6 | GO:0034987 | immunoglobulin receptor binding(GO:0034987) |
0.1 | 3.0 | GO:0050840 | extracellular matrix binding(GO:0050840) |
0.1 | 2.9 | GO:0042056 | chemoattractant activity(GO:0042056) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 7.4 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.0 | 4.2 | PID RHOA REG PATHWAY | Regulation of RhoA activity |
0.0 | 3.8 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.1 | 3.2 | SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES | Genes related to regulation of the actin cytoskeleton |
0.1 | 2.6 | PID IL8 CXCR2 PATHWAY | IL8- and CXCR2-mediated signaling events |
0.0 | 2.5 | PID EPHB FWD PATHWAY | EPHB forward signaling |
0.0 | 2.2 | NABA COLLAGENS | Genes encoding collagen proteins |
0.0 | 2.2 | PID ERA GENOMIC PATHWAY | Validated nuclear estrogen receptor alpha network |
0.0 | 1.8 | PID TRKR PATHWAY | Neurotrophic factor-mediated Trk receptor signaling |
0.0 | 1.8 | PID HDAC CLASSII PATHWAY | Signaling events mediated by HDAC Class II |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 10.5 | REACTOME PEPTIDE LIGAND BINDING RECEPTORS | Genes involved in Peptide ligand-binding receptors |
0.0 | 5.9 | REACTOME TRANSPORT OF INORGANIC CATIONS ANIONS AND AMINO ACIDS OLIGOPEPTIDES | Genes involved in Transport of inorganic cations/anions and amino acids/oligopeptides |
0.1 | 4.5 | REACTOME CGMP EFFECTS | Genes involved in cGMP effects |
0.1 | 4.0 | REACTOME SMOOTH MUSCLE CONTRACTION | Genes involved in Smooth Muscle Contraction |
0.0 | 4.0 | REACTOME NRAGE SIGNALS DEATH THROUGH JNK | Genes involved in NRAGE signals death through JNK |
0.1 | 2.9 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.1 | 2.7 | REACTOME PLATELET CALCIUM HOMEOSTASIS | Genes involved in Platelet calcium homeostasis |
0.1 | 2.5 | REACTOME HS GAG DEGRADATION | Genes involved in HS-GAG degradation |
0.0 | 2.4 | REACTOME BMAL1 CLOCK NPAS2 ACTIVATES CIRCADIAN EXPRESSION | Genes involved in BMAL1:CLOCK/NPAS2 Activates Circadian Expression |
0.1 | 2.2 | REACTOME CHYLOMICRON MEDIATED LIPID TRANSPORT | Genes involved in Chylomicron-mediated lipid transport |