avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Pbx1 | mm10_v2_chr1_-_168431695_168431750 | -0.37 | 2.4e-02 | Click! |
Pbx3 | mm10_v2_chr2_-_34372004_34372044 | 0.01 | 9.7e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr8_+_122848367 Show fit | 5.98 |
ENSMUST00000034443.5
|
cadherin 15 |
|
chr2_-_76982455 Show fit | 1.48 |
ENSMUST00000011934.5
ENSMUST00000099981.2 ENSMUST00000099980.3 ENSMUST00000111882.2 ENSMUST00000140091.1 |
titin |
|
chr13_-_55831378 Show fit | 1.02 |
ENSMUST00000021968.6
|
paired-like homeodomain transcription factor 1 |
|
chr2_+_152911311 Show fit | 0.99 |
ENSMUST00000028970.7
|
myosin, light polypeptide kinase 2, skeletal muscle |
|
chr9_-_31913462 Show fit | 0.85 |
ENSMUST00000116615.3
|
BarH-like homeobox 2 |
|
chrX_-_95478107 Show fit | 0.73 |
ENSMUST00000033549.2
|
ankyrin repeat and SOCS box-containing 12 |
|
chr7_-_126463100 Show fit | 0.71 |
ENSMUST00000032974.6
|
ATPase, Ca++ transporting, cardiac muscle, fast twitch 1 |
|
chr13_-_93144557 Show fit | 0.70 |
ENSMUST00000062122.3
|
cardiomyopathy associated 5 |
|
chr11_-_5803733 Show fit | 0.69 |
ENSMUST00000020768.3
|
phosphoglycerate mutase 2 |
|
chr7_+_19291070 Show fit | 0.65 |
ENSMUST00000108468.3
|
reticulon 2 (Z-band associated protein) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 5.9 | GO:0007156 | homophilic cell adhesion via plasma membrane adhesion molecules(GO:0007156) |
0.4 | 1.7 | GO:0031448 | regulation of fast-twitch skeletal muscle fiber contraction(GO:0031446) positive regulation of fast-twitch skeletal muscle fiber contraction(GO:0031448) |
0.4 | 1.5 | GO:0043056 | forward locomotion(GO:0043056) |
0.3 | 1.0 | GO:0014707 | branchiomeric skeletal muscle development(GO:0014707) |
0.2 | 1.0 | GO:0048769 | sarcomerogenesis(GO:0048769) |
0.2 | 0.8 | GO:0043456 | regulation of pentose-phosphate shunt(GO:0043456) |
0.1 | 0.8 | GO:0042637 | catagen(GO:0042637) |
0.1 | 0.7 | GO:0070885 | negative regulation of calcineurin-NFAT signaling cascade(GO:0070885) |
0.2 | 0.6 | GO:0001928 | regulation of exocyst assembly(GO:0001928) |
0.1 | 0.6 | GO:0018101 | protein citrullination(GO:0018101) histone citrullination(GO:0036414) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 5.3 | GO:0031594 | neuromuscular junction(GO:0031594) |
0.1 | 1.3 | GO:0005862 | muscle thin filament tropomyosin(GO:0005862) |
0.0 | 1.3 | GO:0005859 | muscle myosin complex(GO:0005859) |
0.1 | 0.7 | GO:0031673 | H zone(GO:0031673) |
0.0 | 0.7 | GO:0043034 | costamere(GO:0043034) |
0.0 | 0.7 | GO:0016235 | aggresome(GO:0016235) |
0.2 | 0.6 | GO:0014802 | terminal cisterna(GO:0014802) |
0.0 | 0.6 | GO:0016234 | inclusion body(GO:0016234) |
0.1 | 0.5 | GO:0016012 | sarcoglycan complex(GO:0016012) |
0.0 | 0.4 | GO:0036057 | filtration diaphragm(GO:0036056) slit diaphragm(GO:0036057) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 2.0 | GO:0004687 | myosin light chain kinase activity(GO:0004687) |
0.1 | 1.5 | GO:0031433 | telethonin binding(GO:0031433) |
0.0 | 1.2 | GO:0008307 | structural constituent of muscle(GO:0008307) |
0.3 | 0.8 | GO:0046538 | bisphosphoglycerate mutase activity(GO:0004082) phosphoglycerate mutase activity(GO:0004619) 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity(GO:0046538) |
0.0 | 0.8 | GO:0030275 | LRR domain binding(GO:0030275) |
0.1 | 0.7 | GO:0005338 | nucleotide-sugar transmembrane transporter activity(GO:0005338) |
0.1 | 0.6 | GO:0004668 | protein-arginine deiminase activity(GO:0004668) |
0.0 | 0.6 | GO:0050699 | WW domain binding(GO:0050699) |
0.0 | 0.5 | GO:0004143 | diacylglycerol kinase activity(GO:0004143) |
0.1 | 0.4 | GO:0004980 | melanocyte-stimulating hormone receptor activity(GO:0004980) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.0 | SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES | Genes related to regulation of the actin cytoskeleton |
0.0 | 0.4 | PID INSULIN GLUCOSE PATHWAY | Insulin-mediated glucose transport |
0.0 | 0.2 | SA PROGRAMMED CELL DEATH | Programmed cell death, or apoptosis, eliminates damaged or unneeded cells. |
0.0 | 0.1 | ST IL 13 PATHWAY | Interleukin 13 (IL-13) Pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 5.8 | REACTOME ADHERENS JUNCTIONS INTERACTIONS | Genes involved in Adherens junctions interactions |
0.0 | 1.3 | REACTOME SMOOTH MUSCLE CONTRACTION | Genes involved in Smooth Muscle Contraction |
0.0 | 0.8 | REACTOME GLYCOLYSIS | Genes involved in Glycolysis |
0.0 | 0.7 | REACTOME PLATELET CALCIUM HOMEOSTASIS | Genes involved in Platelet calcium homeostasis |
0.0 | 0.7 | REACTOME INTERFERON GAMMA SIGNALING | Genes involved in Interferon gamma signaling |
0.0 | 0.5 | REACTOME EFFECTS OF PIP2 HYDROLYSIS | Genes involved in Effects of PIP2 hydrolysis |
0.0 | 0.4 | REACTOME INTERFERON ALPHA BETA SIGNALING | Genes involved in Interferon alpha/beta signaling |
0.0 | 0.3 | REACTOME BILE SALT AND ORGANIC ANION SLC TRANSPORTERS | Genes involved in Bile salt and organic anion SLC transporters |
0.0 | 0.2 | REACTOME DOWNREGULATION OF TGF BETA RECEPTOR SIGNALING | Genes involved in Downregulation of TGF-beta receptor signaling |
0.0 | 0.2 | REACTOME INFLAMMASOMES | Genes involved in Inflammasomes |