avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Pitx1 | mm10_v2_chr13_-_55831378_55831425 | 0.69 | 3.8e-06 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr14_+_27000362 Show fit | 4.37 |
ENSMUST00000035433.8
|
homeobox gene expressed in ES cells |
|
chr2_+_101624734 Show fit | 2.98 |
ENSMUST00000111227.1
|
recombination activating gene 2 |
|
chr16_-_76022266 Show fit | 2.68 |
ENSMUST00000114240.1
|
SAM domain, SH3 domain and nuclear localization signals, 1 |
|
chr14_-_70635946 Show fit | 2.66 |
ENSMUST00000022695.9
|
dematin actin binding protein |
|
chr15_-_76669811 Show fit | 2.60 |
ENSMUST00000037824.4
|
forkhead box H1 |
|
chr11_+_67277124 Show fit | 2.48 |
ENSMUST00000019625.5
|
myosin, heavy polypeptide 8, skeletal muscle, perinatal |
|
chr19_+_8617991 Show fit | 2.46 |
ENSMUST00000010250.2
|
solute carrier family 22 (organic anion transporter), member 6 |
|
chr7_+_16781341 Show fit | 2.41 |
ENSMUST00000108496.2
|
solute carrier family 1 (neutral amino acid transporter), member 5 |
|
chr11_-_100135928 Show fit | 2.28 |
ENSMUST00000107411.2
|
keratin 15 |
|
chr11_-_100121558 Show fit | 2.08 |
ENSMUST00000007275.2
|
keratin 13 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 4.4 | GO:0030916 | otic vesicle formation(GO:0030916) |
0.6 | 2.9 | GO:0031444 | slow-twitch skeletal muscle fiber contraction(GO:0031444) |
0.9 | 2.7 | GO:0035585 | calcium-mediated signaling using extracellular calcium source(GO:0035585) |
0.1 | 2.7 | GO:0050869 | negative regulation of B cell activation(GO:0050869) |
0.7 | 2.6 | GO:0035054 | embryonic heart tube anterior/posterior pattern specification(GO:0035054) |
0.2 | 2.5 | GO:0015747 | urate transport(GO:0015747) |
0.2 | 2.5 | GO:0030049 | muscle filament sliding(GO:0030049) |
0.6 | 2.4 | GO:0015825 | L-serine transport(GO:0015825) |
0.7 | 2.1 | GO:0002358 | B cell homeostatic proliferation(GO:0002358) |
0.0 | 1.8 | GO:0007030 | Golgi organization(GO:0007030) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.8 | GO:0005901 | caveola(GO:0005901) |
0.2 | 2.9 | GO:0005861 | troponin complex(GO:0005861) |
0.7 | 2.7 | GO:0031095 | platelet dense tubular network membrane(GO:0031095) |
0.5 | 2.6 | GO:0032444 | activin responsive factor complex(GO:0032444) |
0.1 | 2.5 | GO:0032982 | myosin filament(GO:0032982) |
0.1 | 1.6 | GO:0030061 | mitochondrial crista(GO:0030061) |
0.1 | 1.4 | GO:0031362 | anchored component of external side of plasma membrane(GO:0031362) |
0.0 | 1.4 | GO:0005882 | intermediate filament(GO:0005882) |
0.1 | 1.2 | GO:0097470 | ribbon synapse(GO:0097470) |
0.1 | 1.1 | GO:0008385 | IkappaB kinase complex(GO:0008385) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.3 | GO:0047485 | protein N-terminus binding(GO:0047485) |
0.3 | 2.9 | GO:0031014 | troponin T binding(GO:0031014) |
0.0 | 2.7 | GO:0001784 | phosphotyrosine binding(GO:0001784) |
0.1 | 2.6 | GO:0070410 | co-SMAD binding(GO:0070410) |
0.0 | 2.6 | GO:0030507 | spectrin binding(GO:0030507) |
0.2 | 2.5 | GO:0031404 | chloride ion binding(GO:0031404) |
0.1 | 2.3 | GO:0004012 | phospholipid-translocating ATPase activity(GO:0004012) |
0.3 | 2.0 | GO:0042731 | PH domain binding(GO:0042731) |
0.1 | 2.0 | GO:0015194 | L-serine transmembrane transporter activity(GO:0015194) serine transmembrane transporter activity(GO:0022889) |
0.1 | 2.0 | GO:0000146 | microfilament motor activity(GO:0000146) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.4 | PID CONE PATHWAY | Visual signal transduction: Cones |
0.0 | 3.0 | PID CMYB PATHWAY | C-MYB transcription factor network |
0.0 | 2.6 | PID SMAD2 3NUCLEAR PATHWAY | Regulation of nuclear SMAD2/3 signaling |
0.1 | 2.1 | PID NFKAPPAB CANONICAL PATHWAY | Canonical NF-kappaB pathway |
0.0 | 1.3 | WNT SIGNALING | Genes related to Wnt-mediated signal transduction |
0.1 | 1.1 | PID THROMBIN PAR4 PATHWAY | PAR4-mediated thrombin signaling events |
0.0 | 1.0 | PID P38 MK2 PATHWAY | p38 signaling mediated by MAPKAP kinases |
0.0 | 0.9 | ST GA12 PATHWAY | G alpha 12 Pathway |
0.0 | 0.8 | PID NETRIN PATHWAY | Netrin-mediated signaling events |
0.0 | 0.8 | PID AR NONGENOMIC PATHWAY | Nongenotropic Androgen signaling |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.9 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.1 | 2.4 | REACTOME AMINO ACID TRANSPORT ACROSS THE PLASMA MEMBRANE | Genes involved in Amino acid transport across the plasma membrane |
0.0 | 2.4 | REACTOME INWARDLY RECTIFYING K CHANNELS | Genes involved in Inwardly rectifying K+ channels |
0.0 | 2.0 | REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION | Genes involved in Transcriptional Regulation of White Adipocyte Differentiation |
0.1 | 1.9 | REACTOME ORGANIC CATION ANION ZWITTERION TRANSPORT | Genes involved in Organic cation/anion/zwitterion transport |
0.0 | 1.8 | REACTOME ION TRANSPORT BY P TYPE ATPASES | Genes involved in Ion transport by P-type ATPases |
0.0 | 1.6 | REACTOME MYOGENESIS | Genes involved in Myogenesis |
0.0 | 1.4 | REACTOME SYNTHESIS OF PC | Genes involved in Synthesis of PC |
0.0 | 1.4 | REACTOME NCAM1 INTERACTIONS | Genes involved in NCAM1 interactions |
0.1 | 1.3 | REACTOME BILE SALT AND ORGANIC ANION SLC TRANSPORTERS | Genes involved in Bile salt and organic anion SLC transporters |