avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Pknox1 | mm10_v2_chr17_+_31564749_31564854 | 0.20 | 2.4e-01 | Click! |
Pknox2 | mm10_v2_chr9_-_37147257_37147323 | -0.14 | 4.3e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr1_-_66945019 Show fit | 4.60 |
ENSMUST00000027151.5
|
myosin, light polypeptide 1 |
|
chr1_-_66945361 Show fit | 3.80 |
ENSMUST00000160100.1
|
myosin, light polypeptide 1 |
|
chr1_+_136052804 Show fit | 1.95 |
ENSMUST00000112064.1
|
calcium channel, voltage-dependent, L type, alpha 1S subunit |
|
chr1_+_136052750 Show fit | 1.91 |
ENSMUST00000160641.1
|
calcium channel, voltage-dependent, L type, alpha 1S subunit |
|
chr1_+_136052771 Show fit | 1.88 |
ENSMUST00000112068.3
|
calcium channel, voltage-dependent, L type, alpha 1S subunit |
|
chr2_-_76982455 Show fit | 1.68 |
ENSMUST00000011934.5
ENSMUST00000099981.2 ENSMUST00000099980.3 ENSMUST00000111882.2 ENSMUST00000140091.1 |
titin |
|
chr9_-_31913462 Show fit | 1.44 |
ENSMUST00000116615.3
|
BarH-like homeobox 2 |
|
chr7_-_131410325 Show fit | 1.16 |
ENSMUST00000154602.1
|
IKAROS family zinc finger 5 |
|
chr1_-_87101590 Show fit | 1.16 |
ENSMUST00000113270.2
|
alkaline phosphatase, intestinal |
|
chr5_-_138619653 Show fit | 1.00 |
ENSMUST00000129832.1
|
zinc finger protein 68 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 8.6 | GO:0060048 | cardiac muscle contraction(GO:0060048) |
0.6 | 5.7 | GO:0002074 | extraocular skeletal muscle development(GO:0002074) |
0.4 | 1.7 | GO:0043056 | forward locomotion(GO:0043056) |
0.1 | 1.6 | GO:0030643 | cellular phosphate ion homeostasis(GO:0030643) cellular trivalent inorganic anion homeostasis(GO:0072502) |
0.1 | 1.4 | GO:0042637 | catagen(GO:0042637) |
0.0 | 1.3 | GO:0032411 | positive regulation of transporter activity(GO:0032411) |
0.2 | 1.0 | GO:0031446 | regulation of fast-twitch skeletal muscle fiber contraction(GO:0031446) positive regulation of fast-twitch skeletal muscle fiber contraction(GO:0031448) |
0.3 | 0.9 | GO:0032877 | positive regulation of DNA endoreduplication(GO:0032877) |
0.2 | 0.8 | GO:0035616 | histone H2B conserved C-terminal lysine deubiquitination(GO:0035616) |
0.1 | 0.8 | GO:0016554 | cytidine to uridine editing(GO:0016554) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 10.2 | GO:0016459 | myosin complex(GO:0016459) |
0.1 | 6.2 | GO:0005891 | voltage-gated calcium channel complex(GO:0005891) |
0.0 | 0.6 | GO:0061700 | GATOR2 complex(GO:0061700) |
0.0 | 0.6 | GO:0031464 | Cul4A-RING E3 ubiquitin ligase complex(GO:0031464) |
0.1 | 0.4 | GO:0000839 | Hrd1p ubiquitin ligase ERAD-L complex(GO:0000839) |
0.0 | 0.4 | GO:0001533 | cornified envelope(GO:0001533) |
0.0 | 0.3 | GO:0005642 | annulate lamellae(GO:0005642) |
0.0 | 0.3 | GO:0045277 | respiratory chain complex IV(GO:0045277) |
0.0 | 0.2 | GO:0098536 | deuterosome(GO:0098536) |
0.0 | 0.2 | GO:0044666 | MLL3/4 complex(GO:0044666) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 9.1 | GO:0005509 | calcium ion binding(GO:0005509) |
0.3 | 6.0 | GO:0008331 | high voltage-gated calcium channel activity(GO:0008331) |
0.3 | 1.9 | GO:0004035 | alkaline phosphatase activity(GO:0004035) |
0.2 | 1.7 | GO:0031433 | telethonin binding(GO:0031433) |
0.4 | 1.6 | GO:0047389 | glycerophosphocholine phosphodiesterase activity(GO:0047389) |
0.1 | 1.4 | GO:0017081 | chloride channel regulator activity(GO:0017081) |
0.1 | 1.0 | GO:0032027 | myosin light chain kinase activity(GO:0004687) myosin light chain binding(GO:0032027) |
0.1 | 0.8 | GO:0004126 | cytidine deaminase activity(GO:0004126) |
0.1 | 0.8 | GO:0061649 | ubiquitinated histone binding(GO:0061649) |
0.0 | 0.8 | GO:0018024 | histone-lysine N-methyltransferase activity(GO:0018024) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.5 | SIG CHEMOTAXIS | Genes related to chemotaxis |
0.0 | 0.5 | PID HDAC CLASSIII PATHWAY | Signaling events mediated by HDAC Class III |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 8.4 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.1 | 6.0 | REACTOME NCAM1 INTERACTIONS | Genes involved in NCAM1 interactions |
0.0 | 1.4 | REACTOME GLYCEROPHOSPHOLIPID BIOSYNTHESIS | Genes involved in Glycerophospholipid biosynthesis |
0.0 | 1.1 | REACTOME PIP3 ACTIVATES AKT SIGNALING | Genes involved in PIP3 activates AKT signaling |
0.0 | 0.4 | REACTOME MITOCHONDRIAL TRNA AMINOACYLATION | Genes involved in Mitochondrial tRNA aminoacylation |
0.0 | 0.3 | REACTOME CYCLIN A B1 ASSOCIATED EVENTS DURING G2 M TRANSITION | Genes involved in Cyclin A/B1 associated events during G2/M transition |
0.0 | 0.3 | REACTOME G0 AND EARLY G1 | Genes involved in G0 and Early G1 |
0.0 | 0.3 | REACTOME DEADENYLATION OF MRNA | Genes involved in Deadenylation of mRNA |
0.0 | 0.2 | REACTOME PASSIVE TRANSPORT BY AQUAPORINS | Genes involved in Passive Transport by Aquaporins |
0.0 | 0.2 | REACTOME REGULATION OF AMPK ACTIVITY VIA LKB1 | Genes involved in Regulation of AMPK activity via LKB1 |