avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Plag1 | mm10_v2_chr4_-_3938354_3938401 | 0.66 | 1.2e-05 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr14_+_80000292 Show fit | 10.52 |
ENSMUST00000088735.3
|
olfactomedin 4 |
|
chr7_-_142657466 Show fit | 10.45 |
ENSMUST00000097936.2
ENSMUST00000000033.5 |
insulin-like growth factor 2 |
|
chr11_+_11684967 Show fit | 10.22 |
ENSMUST00000126058.1
ENSMUST00000141436.1 |
IKAROS family zinc finger 1 |
|
chr7_-_142659482 Show fit | 9.85 |
ENSMUST00000121128.1
|
insulin-like growth factor 2 |
|
chr11_+_74619594 Show fit | 9.05 |
ENSMUST00000100866.2
|
RIKEN cDNA E130309D14 gene |
|
chr16_-_18622403 Show fit | 8.75 |
ENSMUST00000167388.1
|
glycoprotein Ib, beta polypeptide |
|
chr18_-_58209926 Show fit | 8.63 |
ENSMUST00000025497.6
|
fibrillin 2 |
|
chr10_+_75948292 Show fit | 8.28 |
ENSMUST00000000926.2
|
pre-B lymphocyte gene 3 |
|
chrX_+_8271133 Show fit | 8.02 |
ENSMUST00000127103.1
ENSMUST00000115591.1 |
solute carrier family 38, member 5 |
|
chr11_-_102082464 Show fit | 7.94 |
ENSMUST00000100398.4
|
membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.7 | 21.3 | GO:0038028 | insulin receptor signaling pathway via phosphatidylinositol 3-kinase(GO:0038028) |
0.2 | 12.3 | GO:0033344 | cholesterol efflux(GO:0033344) |
3.4 | 10.2 | GO:0045660 | positive regulation of neutrophil differentiation(GO:0045660) |
3.2 | 9.7 | GO:0060217 | hemangioblast cell differentiation(GO:0060217) |
1.6 | 9.7 | GO:0034441 | plasma lipoprotein particle oxidation(GO:0034441) |
0.3 | 9.0 | GO:0090036 | regulation of protein kinase C signaling(GO:0090036) |
0.7 | 8.7 | GO:0015816 | glycine transport(GO:0015816) |
1.7 | 8.6 | GO:0071694 | protein localization to extracellular region(GO:0071692) maintenance of protein location in extracellular region(GO:0071694) |
0.6 | 8.4 | GO:0010529 | regulation of transposition(GO:0010528) negative regulation of transposition(GO:0010529) |
0.8 | 8.3 | GO:0051025 | negative regulation of immunoglobulin secretion(GO:0051025) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 16.3 | GO:0043198 | dendritic shaft(GO:0043198) |
0.0 | 13.7 | GO:0005578 | proteinaceous extracellular matrix(GO:0005578) |
0.2 | 10.6 | GO:0031941 | filamentous actin(GO:0031941) |
0.7 | 10.5 | GO:0042581 | specific granule(GO:0042581) |
3.2 | 9.7 | GO:0033193 | Lsd1/2 complex(GO:0033193) |
0.7 | 9.6 | GO:0044327 | dendritic spine head(GO:0044327) |
0.4 | 9.5 | GO:0033017 | sarcoplasmic reticulum membrane(GO:0033017) |
0.6 | 9.1 | GO:0031618 | nuclear pericentric heterochromatin(GO:0031618) |
0.4 | 8.9 | GO:0034362 | low-density lipoprotein particle(GO:0034362) |
0.2 | 8.7 | GO:0035371 | microtubule plus-end(GO:0035371) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 21.3 | GO:0043539 | protein serine/threonine kinase activator activity(GO:0043539) |
0.3 | 16.4 | GO:0005201 | extracellular matrix structural constituent(GO:0005201) |
4.0 | 16.1 | GO:0034041 | sterol-transporting ATPase activity(GO:0034041) |
0.3 | 10.2 | GO:0008187 | poly-pyrimidine tract binding(GO:0008187) |
1.0 | 9.7 | GO:0003847 | 1-alkyl-2-acetylglycerophosphocholine esterase activity(GO:0003847) |
0.2 | 9.1 | GO:0070888 | E-box binding(GO:0070888) |
0.8 | 8.7 | GO:0015187 | glycine transmembrane transporter activity(GO:0015187) |
2.2 | 8.6 | GO:0047844 | deoxycytidine deaminase activity(GO:0047844) |
0.7 | 7.9 | GO:0031749 | D2 dopamine receptor binding(GO:0031749) |
0.2 | 7.2 | GO:0004012 | phospholipid-translocating ATPase activity(GO:0004012) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 14.1 | PID EPHRINB REV PATHWAY | Ephrin B reverse signaling |
0.1 | 14.0 | PID SMAD2 3NUCLEAR PATHWAY | Regulation of nuclear SMAD2/3 signaling |
0.2 | 11.7 | NABA COLLAGENS | Genes encoding collagen proteins |
0.2 | 11.6 | PID NFAT TFPATHWAY | Calcineurin-regulated NFAT-dependent transcription in lymphocytes |
0.2 | 10.7 | PID AJDISS 2PATHWAY | Posttranslational regulation of adherens junction stability and dissassembly |
0.2 | 10.0 | SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES | Genes related to regulation of the actin cytoskeleton |
0.1 | 9.5 | PID RAC1 REG PATHWAY | Regulation of RAC1 activity |
0.2 | 8.8 | PID LIS1 PATHWAY | Lissencephaly gene (LIS1) in neuronal migration and development |
0.1 | 6.5 | PID AURORA B PATHWAY | Aurora B signaling |
0.1 | 5.5 | PID FOXM1 PATHWAY | FOXM1 transcription factor network |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.9 | 19.4 | REACTOME REGULATION OF INSULIN LIKE GROWTH FACTOR IGF ACTIVITY BY INSULIN LIKE GROWTH FACTOR BINDING PROTEINS IGFBPS | Genes involved in Regulation of Insulin-like Growth Factor (IGF) Activity by Insulin-like Growth Factor Binding Proteins (IGFBPs) |
0.3 | 15.8 | REACTOME AMINO ACID TRANSPORT ACROSS THE PLASMA MEMBRANE | Genes involved in Amino acid transport across the plasma membrane |
0.3 | 15.8 | REACTOME RECYCLING PATHWAY OF L1 | Genes involved in Recycling pathway of L1 |
0.6 | 15.4 | REACTOME ABCA TRANSPORTERS IN LIPID HOMEOSTASIS | Genes involved in ABCA transporters in lipid homeostasis |
0.2 | 11.7 | REACTOME COLLAGEN FORMATION | Genes involved in Collagen formation |
0.6 | 10.4 | REACTOME SYNTHESIS SECRETION AND DEACYLATION OF GHRELIN | Genes involved in Synthesis, Secretion, and Deacylation of Ghrelin |
0.6 | 9.7 | REACTOME PLATELET ADHESION TO EXPOSED COLLAGEN | Genes involved in Platelet Adhesion to exposed collagen |
0.3 | 7.0 | REACTOME G0 AND EARLY G1 | Genes involved in G0 and Early G1 |
0.1 | 6.3 | REACTOME ION TRANSPORT BY P TYPE ATPASES | Genes involved in Ion transport by P-type ATPases |
0.2 | 5.9 | REACTOME SMAD2 SMAD3 SMAD4 HETEROTRIMER REGULATES TRANSCRIPTION | Genes involved in SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription |