avrg: GSE58827: Dynamics of the Mouse Liver
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr15_-_79285502 Show fit | 23.25 |
ENSMUST00000165408.1
|
BAI1-associated protein 2-like 2 |
|
chr8_+_80494032 Show fit | 17.89 |
ENSMUST00000063359.6
|
glycophorin A |
|
chr1_-_132390301 Show fit | 15.87 |
ENSMUST00000132435.1
|
transmembrane and coiled-coil domains 2 |
|
chr6_-_102464667 Show fit | 12.85 |
ENSMUST00000032159.6
|
contactin 3 |
|
chr15_-_79285470 Show fit | 12.78 |
ENSMUST00000170955.1
|
BAI1-associated protein 2-like 2 |
|
chr11_+_24078111 Show fit | 12.56 |
ENSMUST00000109516.1
|
B cell CLL/lymphoma 11A (zinc finger protein) |
|
chr6_+_34412334 Show fit | 11.96 |
ENSMUST00000007449.8
|
aldo-keto reductase family 1, member B7 |
|
chr8_-_71725696 Show fit | 9.63 |
ENSMUST00000153800.1
ENSMUST00000146100.1 |
FCH domain only 1 |
|
chr8_-_85365317 Show fit | 9.40 |
ENSMUST00000034133.7
|
myosin light chain kinase 3 |
|
chr8_-_85365341 Show fit | 9.30 |
ENSMUST00000121972.1
|
myosin light chain kinase 3 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.6 | 36.0 | GO:2000251 | positive regulation of actin cytoskeleton reorganization(GO:2000251) |
3.1 | 18.7 | GO:0002528 | regulation of vascular permeability involved in acute inflammatory response(GO:0002528) |
2.2 | 17.9 | GO:0007016 | cytoskeletal anchoring at plasma membrane(GO:0007016) |
0.2 | 16.2 | GO:0042982 | amyloid precursor protein metabolic process(GO:0042982) |
3.1 | 12.6 | GO:1904800 | regulation of neuron remodeling(GO:1904799) negative regulation of neuron remodeling(GO:1904800) |
0.4 | 10.6 | GO:0048268 | clathrin coat assembly(GO:0048268) |
0.2 | 9.1 | GO:0035025 | positive regulation of Rho protein signal transduction(GO:0035025) |
0.4 | 8.4 | GO:0000028 | ribosomal small subunit assembly(GO:0000028) |
0.0 | 7.8 | GO:0007051 | spindle organization(GO:0007051) |
0.8 | 6.7 | GO:1902746 | regulation of lens fiber cell differentiation(GO:1902746) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
3.0 | 36.0 | GO:0071439 | clathrin complex(GO:0071439) |
0.0 | 16.9 | GO:0009897 | external side of plasma membrane(GO:0009897) |
0.1 | 10.6 | GO:0005905 | clathrin-coated pit(GO:0005905) |
0.0 | 8.8 | GO:0031234 | extrinsic component of cytoplasmic side of plasma membrane(GO:0031234) |
0.2 | 8.4 | GO:0022627 | cytosolic small ribosomal subunit(GO:0022627) |
0.0 | 8.1 | GO:0031225 | anchored component of membrane(GO:0031225) |
0.1 | 7.8 | GO:0000922 | spindle pole(GO:0000922) |
0.4 | 7.1 | GO:0031616 | spindle pole centrosome(GO:0031616) |
0.9 | 5.5 | GO:0030870 | Mre11 complex(GO:0030870) |
0.4 | 5.3 | GO:0000177 | cytoplasmic exosome (RNase complex)(GO:0000177) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 36.0 | GO:0005543 | phospholipid binding(GO:0005543) |
2.7 | 18.7 | GO:0004687 | myosin light chain kinase activity(GO:0004687) |
1.9 | 16.9 | GO:0004032 | alditol:NADP+ 1-oxidoreductase activity(GO:0004032) |
0.0 | 16.3 | GO:0003712 | transcription cofactor activity(GO:0003712) |
0.6 | 9.6 | GO:0035612 | AP-2 adaptor complex binding(GO:0035612) |
0.8 | 8.4 | GO:0070181 | small ribosomal subunit rRNA binding(GO:0070181) |
0.4 | 6.7 | GO:0004861 | cyclin-dependent protein serine/threonine kinase inhibitor activity(GO:0004861) |
0.1 | 6.7 | GO:0098811 | transcriptional activator activity, RNA polymerase II transcription factor binding(GO:0001190) transcriptional repressor activity, RNA polymerase II activating transcription factor binding(GO:0098811) |
0.0 | 6.4 | GO:0004721 | phosphoprotein phosphatase activity(GO:0004721) |
2.0 | 6.0 | GO:0035717 | chemokine (C-C motif) ligand 7 binding(GO:0035717) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 10.6 | PID E2F PATHWAY | E2F transcription factor network |
0.2 | 7.6 | PID AURORA A PATHWAY | Aurora A signaling |
0.2 | 7.0 | PID CDC42 REG PATHWAY | Regulation of CDC42 activity |
0.1 | 5.5 | PID BARD1 PATHWAY | BARD1 signaling events |
0.3 | 5.2 | PID LPA4 PATHWAY | LPA4-mediated signaling events |
0.0 | 5.0 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.1 | 4.8 | PID FOXM1 PATHWAY | FOXM1 transcription factor network |
0.2 | 4.3 | PID SYNDECAN 3 PATHWAY | Syndecan-3-mediated signaling events |
0.2 | 2.6 | PID S1P S1P4 PATHWAY | S1P4 pathway |
0.1 | 2.6 | PID NFKAPPAB CANONICAL PATHWAY | Canonical NF-kappaB pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 8.4 | REACTOME FORMATION OF THE TERNARY COMPLEX AND SUBSEQUENTLY THE 43S COMPLEX | Genes involved in Formation of the ternary complex, and subsequently, the 43S complex |
1.0 | 6.0 | REACTOME BETA DEFENSINS | Genes involved in Beta defensins |
0.0 | 5.9 | REACTOME PEPTIDE LIGAND BINDING RECEPTORS | Genes involved in Peptide ligand-binding receptors |
0.3 | 5.5 | REACTOME HOMOLOGOUS RECOMBINATION REPAIR OF REPLICATION INDEPENDENT DOUBLE STRAND BREAKS | Genes involved in Homologous recombination repair of replication-independent double-strand breaks |
0.4 | 5.2 | REACTOME P2Y RECEPTORS | Genes involved in P2Y receptors |
0.2 | 4.9 | REACTOME KINESINS | Genes involved in Kinesins |
0.1 | 3.8 | REACTOME G1 PHASE | Genes involved in G1 Phase |
0.0 | 3.2 | REACTOME G ALPHA Q SIGNALLING EVENTS | Genes involved in G alpha (q) signalling events |
0.1 | 2.9 | REACTOME METAL ION SLC TRANSPORTERS | Genes involved in Metal ion SLC transporters |
0.1 | 2.6 | REACTOME NEGATIVE REGULATORS OF RIG I MDA5 SIGNALING | Genes involved in Negative regulators of RIG-I/MDA5 signaling |