avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Ppara | mm10_v2_chr15_+_85736107_85736131 | 0.05 | 7.9e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr11_-_69617879 Show fit | 11.17 |
ENSMUST00000005334.2
|
sex hormone binding globulin |
|
chr7_-_142578093 Show fit | 7.55 |
ENSMUST00000149974.1
ENSMUST00000152754.1 |
H19 fetal liver mRNA |
|
chr7_-_142578139 Show fit | 7.50 |
ENSMUST00000136359.1
|
H19 fetal liver mRNA |
|
chr3_+_114030532 Show fit | 5.63 |
ENSMUST00000123619.1
ENSMUST00000092155.5 |
collagen, type XI, alpha 1 |
|
chr9_+_111019284 Show fit | 5.59 |
ENSMUST00000035077.3
|
lactotransferrin |
|
chr8_-_123894736 Show fit | 5.46 |
ENSMUST00000034453.4
|
actin, alpha 1, skeletal muscle |
|
chrX_+_101449078 Show fit | 4.43 |
ENSMUST00000033674.5
|
integrin beta 1 binding protein 2 |
|
chr12_+_109459843 Show fit | 4.26 |
ENSMUST00000173812.1
|
delta-like 1 homolog (Drosophila) |
|
chr15_+_80091320 Show fit | 4.23 |
ENSMUST00000009728.6
ENSMUST00000009727.5 |
synaptogyrin 1 |
|
chr9_+_65101453 Show fit | 4.18 |
ENSMUST00000077696.6
ENSMUST00000035499.4 ENSMUST00000166273.1 |
immunoglobulin superfamily, DCC subclass, member 4 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.2 | 15.0 | GO:2000653 | regulation of genetic imprinting(GO:2000653) |
0.0 | 9.4 | GO:0048588 | developmental cell growth(GO:0048588) |
0.3 | 8.8 | GO:0051764 | actin crosslink formation(GO:0051764) |
0.1 | 6.3 | GO:0042100 | B cell proliferation(GO:0042100) |
0.2 | 5.7 | GO:0008340 | determination of adult lifespan(GO:0008340) |
0.9 | 5.6 | GO:1902732 | antifungal humoral response(GO:0019732) positive regulation of chondrocyte proliferation(GO:1902732) |
0.8 | 5.6 | GO:0035989 | tendon development(GO:0035989) |
0.5 | 5.5 | GO:0030240 | skeletal muscle thin filament assembly(GO:0030240) |
0.2 | 4.8 | GO:0048172 | regulation of short-term neuronal synaptic plasticity(GO:0048172) |
0.5 | 4.6 | GO:0060372 | regulation of atrial cardiac muscle cell membrane repolarization(GO:0060372) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 16.4 | GO:0005844 | polysome(GO:0005844) |
0.2 | 9.8 | GO:0005865 | striated muscle thin filament(GO:0005865) |
0.6 | 7.2 | GO:0071439 | clathrin complex(GO:0071439) |
0.1 | 6.3 | GO:0016529 | sarcoplasmic reticulum(GO:0016529) |
0.0 | 6.2 | GO:0031965 | nuclear membrane(GO:0031965) |
1.4 | 5.6 | GO:0044279 | other organism cell membrane(GO:0044218) other organism membrane(GO:0044279) |
0.4 | 5.6 | GO:0098643 | fibrillar collagen trimer(GO:0005583) banded collagen fibril(GO:0098643) |
0.1 | 5.3 | GO:0030672 | synaptic vesicle membrane(GO:0030672) exocytic vesicle membrane(GO:0099501) |
0.0 | 5.2 | GO:0005741 | mitochondrial outer membrane(GO:0005741) |
0.0 | 5.0 | GO:0009898 | cytoplasmic side of plasma membrane(GO:0009898) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 7.6 | GO:0003682 | chromatin binding(GO:0003682) |
0.0 | 6.9 | GO:0044325 | ion channel binding(GO:0044325) |
0.2 | 5.6 | GO:0043539 | protein serine/threonine kinase activator activity(GO:0043539) |
0.1 | 5.6 | GO:0005201 | extracellular matrix structural constituent(GO:0005201) |
0.0 | 5.0 | GO:0017124 | SH3 domain binding(GO:0017124) |
0.1 | 4.3 | GO:0032452 | histone demethylase activity(GO:0032452) |
0.0 | 4.1 | GO:0004725 | protein tyrosine phosphatase activity(GO:0004725) |
0.0 | 4.0 | GO:0003714 | transcription corepressor activity(GO:0003714) |
1.3 | 3.9 | GO:0052658 | inositol-1,4,5-trisphosphate 5-phosphatase activity(GO:0052658) |
0.2 | 3.9 | GO:0030215 | semaphorin receptor binding(GO:0030215) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 12.2 | PID AR NONGENOMIC PATHWAY | Nongenotropic Androgen signaling |
0.1 | 8.6 | PID NOTCH PATHWAY | Notch signaling pathway |
0.1 | 6.6 | PID RHOA PATHWAY | RhoA signaling pathway |
0.1 | 5.7 | PID SYNDECAN 1 PATHWAY | Syndecan-1-mediated signaling events |
0.1 | 5.5 | PID FOXM1 PATHWAY | FOXM1 transcription factor network |
0.1 | 5.1 | ST JNK MAPK PATHWAY | JNK MAPK Pathway |
0.1 | 3.4 | PID RAS PATHWAY | Regulation of Ras family activation |
0.1 | 3.3 | PID IL6 7 PATHWAY | IL6-mediated signaling events |
0.1 | 3.2 | PID RAC1 REG PATHWAY | Regulation of RAC1 activity |
0.3 | 3.1 | SA G2 AND M PHASES | Cdc25 activates the cdc2/cyclin B complex to induce the G2/M transition. |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 6.6 | REACTOME CGMP EFFECTS | Genes involved in cGMP effects |
0.1 | 6.2 | REACTOME COLLAGEN FORMATION | Genes involved in Collagen formation |
0.2 | 5.9 | REACTOME LATENT INFECTION OF HOMO SAPIENS WITH MYCOBACTERIUM TUBERCULOSIS | Genes involved in Latent infection of Homo sapiens with Mycobacterium tuberculosis |
0.3 | 4.8 | REACTOME CYCLIN A B1 ASSOCIATED EVENTS DURING G2 M TRANSITION | Genes involved in Cyclin A/B1 associated events during G2/M transition |
0.1 | 4.8 | REACTOME ACTIVATED NOTCH1 TRANSMITS SIGNAL TO THE NUCLEUS | Genes involved in Activated NOTCH1 Transmits Signal to the Nucleus |
0.1 | 4.7 | REACTOME METABOLISM OF STEROID HORMONES AND VITAMINS A AND D | Genes involved in Metabolism of steroid hormones and vitamins A and D |
0.1 | 3.9 | REACTOME SYNTHESIS OF PIPS AT THE PLASMA MEMBRANE | Genes involved in Synthesis of PIPs at the plasma membrane |
0.3 | 3.8 | REACTOME PROSTANOID LIGAND RECEPTORS | Genes involved in Prostanoid ligand receptors |
0.1 | 3.0 | REACTOME TIGHT JUNCTION INTERACTIONS | Genes involved in Tight junction interactions |
0.1 | 2.8 | REACTOME UNBLOCKING OF NMDA RECEPTOR GLUTAMATE BINDING AND ACTIVATION | Genes involved in Unblocking of NMDA receptor, glutamate binding and activation |