avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Prox1 | mm10_v2_chr1_-_190170671_190170744 | -0.11 | 5.2e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr14_-_51146757 Show fit | 10.17 |
ENSMUST00000080126.2
|
ribonuclease, RNase A family, 1 (pancreatic) |
|
chr4_-_137430517 Show fit | 8.88 |
ENSMUST00000102522.4
|
chymotrypsin-like elastase family, member 3B |
|
chr3_+_153844209 Show fit | 4.75 |
ENSMUST00000044089.3
|
ankyrin repeat and SOCS box-containing 17 |
|
chr4_-_137409777 Show fit | 4.69 |
ENSMUST00000024200.6
|
predicted gene 13011 |
|
chr19_-_15924560 Show fit | 3.87 |
ENSMUST00000162053.1
|
phosphoserine aminotransferase 1 |
|
chr18_-_68429235 Show fit | 3.62 |
ENSMUST00000052347.6
|
melanocortin 2 receptor |
|
chr7_+_142441808 Show fit | 2.72 |
ENSMUST00000105971.1
ENSMUST00000145287.1 |
troponin I, skeletal, fast 2 |
|
chr17_+_29319183 Show fit | 2.54 |
ENSMUST00000114699.1
ENSMUST00000155348.1 |
peptidase inhibitor 16 |
|
chr14_-_55944536 Show fit | 2.52 |
ENSMUST00000022834.6
|
chymase 1, mast cell |
|
chr4_-_68954351 Show fit | 2.30 |
ENSMUST00000030036.5
|
bone morphogenic protein/retinoic acid inducible neural specific 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 10.2 | GO:0090501 | RNA phosphodiester bond hydrolysis(GO:0090501) |
0.1 | 8.9 | GO:0008203 | cholesterol metabolic process(GO:0008203) |
0.1 | 4.7 | GO:0003009 | skeletal muscle contraction(GO:0003009) |
0.8 | 3.9 | GO:0006564 | L-serine biosynthetic process(GO:0006564) |
0.0 | 3.6 | GO:0030819 | positive regulation of cAMP biosynthetic process(GO:0030819) |
0.9 | 2.6 | GO:0072244 | metanephric glomerular epithelium development(GO:0072244) |
0.6 | 2.5 | GO:0042222 | interleukin-1 biosynthetic process(GO:0042222) |
0.2 | 2.5 | GO:0061052 | negative regulation of cell growth involved in cardiac muscle cell development(GO:0061052) |
0.1 | 2.3 | GO:0007614 | short-term memory(GO:0007614) |
0.0 | 1.9 | GO:1990830 | response to leukemia inhibitory factor(GO:1990823) cellular response to leukemia inhibitory factor(GO:1990830) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 2.7 | GO:0005861 | troponin complex(GO:0005861) |
0.0 | 1.7 | GO:0016529 | sarcoplasmic reticulum(GO:0016529) |
0.0 | 1.5 | GO:0005581 | collagen trimer(GO:0005581) |
0.0 | 1.3 | GO:0005921 | gap junction(GO:0005921) |
0.0 | 1.2 | GO:0071565 | nBAF complex(GO:0071565) |
0.0 | 1.2 | GO:0008074 | guanylate cyclase complex, soluble(GO:0008074) |
0.1 | 1.1 | GO:0048188 | Set1C/COMPASS complex(GO:0048188) |
0.1 | 1.0 | GO:1990023 | mitotic spindle midzone(GO:1990023) |
0.1 | 0.9 | GO:0071818 | BAT3 complex(GO:0071818) ER membrane insertion complex(GO:0072379) |
0.0 | 0.8 | GO:0000145 | exocyst(GO:0000145) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 11.4 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
1.5 | 10.2 | GO:0016892 | endoribonuclease activity, producing 3'-phosphomonoesters(GO:0016892) |
0.6 | 3.6 | GO:0004977 | melanocortin receptor activity(GO:0004977) |
0.3 | 2.7 | GO:0031014 | troponin T binding(GO:0031014) |
0.0 | 2.5 | GO:0030414 | peptidase inhibitor activity(GO:0030414) |
0.1 | 1.8 | GO:0008483 | transaminase activity(GO:0008483) |
0.2 | 1.5 | GO:0033691 | sialic acid binding(GO:0033691) |
0.0 | 1.3 | GO:0003730 | mRNA 3'-UTR binding(GO:0003730) |
0.1 | 1.2 | GO:0016176 | superoxide-generating NADPH oxidase activator activity(GO:0016176) |
0.1 | 1.2 | GO:0004016 | adenylate cyclase activity(GO:0004016) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 7.8 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.0 | 2.9 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.1 | 1.2 | PID LPA4 PATHWAY | LPA4-mediated signaling events |
0.0 | 1.2 | PID S1P S1P1 PATHWAY | S1P1 pathway |
0.1 | 1.0 | ST TYPE I INTERFERON PATHWAY | Type I Interferon (alpha/beta IFN) Pathway |
0.0 | 0.6 | ST GRANULE CELL SURVIVAL PATHWAY | Granule Cell Survival Pathway is a specific case of more general PAC1 Receptor Pathway. |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.7 | REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION | Genes involved in Antigen processing: Ubiquitination & Proteasome degradation |
0.0 | 3.6 | REACTOME G ALPHA S SIGNALLING EVENTS | Genes involved in G alpha (s) signalling events |
0.1 | 2.7 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.1 | 2.5 | REACTOME DEGRADATION OF THE EXTRACELLULAR MATRIX | Genes involved in Degradation of the extracellular matrix |
0.0 | 2.3 | REACTOME RESPONSE TO ELEVATED PLATELET CYTOSOLIC CA2 | Genes involved in Response to elevated platelet cytosolic Ca2+ |
0.0 | 2.0 | REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION | Genes involved in Transcriptional Regulation of White Adipocyte Differentiation |
0.1 | 1.8 | REACTOME AMINO ACID SYNTHESIS AND INTERCONVERSION TRANSAMINATION | Genes involved in Amino acid synthesis and interconversion (transamination) |
0.1 | 1.2 | REACTOME ADENYLATE CYCLASE ACTIVATING PATHWAY | Genes involved in Adenylate cyclase activating pathway |
0.0 | 0.6 | REACTOME GLYCOSPHINGOLIPID METABOLISM | Genes involved in Glycosphingolipid metabolism |
0.0 | 0.2 | REACTOME NEF MEDIATED DOWNREGULATION OF MHC CLASS I COMPLEX CELL SURFACE EXPRESSION | Genes involved in Nef mediated downregulation of MHC class I complex cell surface expression |