avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Isx | mm10_v2_chr8_+_74873540_74873615 | -0.20 | 2.4e-01 | Click! |
Prrx1 | mm10_v2_chr1_-_163289214_163289235 | -0.12 | 5.0e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr11_-_99322943 Show fit | 1.65 |
ENSMUST00000038004.2
|
keratin 25 |
|
chr8_+_21565368 Show fit | 1.55 |
ENSMUST00000084040.2
|
predicted gene 14850 |
|
chr16_-_45693658 Show fit | 1.38 |
ENSMUST00000114562.2
ENSMUST00000036617.7 |
transmembrane serine protease 7 |
|
chr8_+_21025545 Show fit | 1.27 |
ENSMUST00000076754.2
|
defensin, alpha, 21 |
|
chr4_-_87806276 Show fit | 1.24 |
ENSMUST00000148059.1
|
myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 |
|
chr1_-_162898665 Show fit | 1.21 |
ENSMUST00000111510.1
ENSMUST00000045902.6 |
flavin containing monooxygenase 2 |
|
chr4_-_87806296 Show fit | 1.17 |
ENSMUST00000126353.1
ENSMUST00000149357.1 |
myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 |
|
chr6_+_37870786 Show fit | 1.15 |
ENSMUST00000120428.1
ENSMUST00000031859.7 |
tripartite motif-containing 24 |
|
chrM_+_11734 Show fit | 1.13 |
ENSMUST00000082418.1
|
mitochondrially encoded NADH dehydrogenase 5 |
|
chr8_+_21391811 Show fit | 1.04 |
ENSMUST00000120874.3
|
predicted gene, 21002 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 2.5 | GO:2000096 | positive regulation of Wnt signaling pathway, planar cell polarity pathway(GO:2000096) |
0.3 | 1.9 | GO:0072592 | oxygen metabolic process(GO:0072592) |
0.1 | 1.6 | GO:0045109 | intermediate filament organization(GO:0045109) |
0.0 | 1.4 | GO:0042773 | ATP synthesis coupled electron transport(GO:0042773) |
0.2 | 1.1 | GO:0070562 | regulation of vitamin D receptor signaling pathway(GO:0070562) |
0.1 | 1.1 | GO:2000253 | positive regulation of feeding behavior(GO:2000253) |
0.1 | 0.9 | GO:0000707 | meiotic DNA recombinase assembly(GO:0000707) |
0.1 | 0.8 | GO:1900827 | positive regulation of cell communication by electrical coupling(GO:0010650) positive regulation of membrane depolarization during cardiac muscle cell action potential(GO:1900827) |
0.0 | 0.8 | GO:0019731 | antibacterial humoral response(GO:0019731) |
0.2 | 0.7 | GO:0002302 | CD8-positive, alpha-beta T cell differentiation involved in immune response(GO:0002302) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.4 | GO:0008023 | transcription elongation factor complex(GO:0008023) |
0.0 | 2.3 | GO:0005882 | intermediate filament(GO:0005882) |
0.0 | 1.3 | GO:0070469 | respiratory chain(GO:0070469) |
0.2 | 1.1 | GO:0005726 | perichromatin fibrils(GO:0005726) |
0.2 | 0.9 | GO:0033063 | Rad51B-Rad51C-Rad51D-XRCC2 complex(GO:0033063) |
0.1 | 0.8 | GO:0005796 | Golgi lumen(GO:0005796) |
0.0 | 0.8 | GO:0014731 | spectrin-associated cytoskeleton(GO:0014731) |
0.2 | 0.7 | GO:0005584 | collagen type I trimer(GO:0005584) |
0.1 | 0.6 | GO:1990357 | terminal web(GO:1990357) |
0.0 | 0.6 | GO:0045179 | apical cortex(GO:0045179) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 1.6 | GO:0004499 | N,N-dimethylaniline monooxygenase activity(GO:0004499) |
0.0 | 1.4 | GO:0050136 | NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136) |
0.2 | 1.1 | GO:0034056 | estrogen response element binding(GO:0034056) |
0.0 | 1.0 | GO:0005537 | mannose binding(GO:0005537) |
0.1 | 0.9 | GO:0000150 | recombinase activity(GO:0000150) |
0.0 | 0.9 | GO:0035497 | cAMP response element binding(GO:0035497) |
0.1 | 0.8 | GO:0002046 | opsin binding(GO:0002046) |
0.1 | 0.8 | GO:0045028 | G-protein coupled nucleotide receptor activity(GO:0001608) G-protein coupled purinergic nucleotide receptor activity(GO:0045028) |
0.0 | 0.8 | GO:0005184 | neuropeptide hormone activity(GO:0005184) |
0.0 | 0.7 | GO:0048407 | platelet-derived growth factor binding(GO:0048407) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.9 | PID AR TF PATHWAY | Regulation of Androgen receptor activity |
0.0 | 1.2 | PID LYMPH ANGIOGENESIS PATHWAY | VEGFR3 signaling in lymphatic endothelium |
0.0 | 0.9 | SIG PIP3 SIGNALING IN B LYMPHOCYTES | Genes related to PIP3 signaling in B lymphocytes |
0.0 | 0.7 | PID CD8 TCR DOWNSTREAM PATHWAY | Downstream signaling in naïve CD8+ T cells |
0.0 | 0.6 | PID SYNDECAN 3 PATHWAY | Syndecan-3-mediated signaling events |
0.0 | 0.4 | PID P38 GAMMA DELTA PATHWAY | Signaling mediated by p38-gamma and p38-delta |
0.0 | 0.4 | SA PTEN PATHWAY | PTEN is a tumor suppressor that dephosphorylates the lipid messenger phosphatidylinositol triphosphate. |
0.0 | 0.3 | ST ADRENERGIC | Adrenergic Pathway |
0.0 | 0.3 | PID MYC PATHWAY | C-MYC pathway |
0.0 | 0.1 | PID ANTHRAX PATHWAY | Cellular roles of Anthrax toxin |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.6 | REACTOME SIGNALING BY FGFR1 FUSION MUTANTS | Genes involved in Signaling by FGFR1 fusion mutants |
0.0 | 1.2 | REACTOME INTERACTION BETWEEN L1 AND ANKYRINS | Genes involved in Interaction between L1 and Ankyrins |
0.0 | 1.2 | REACTOME PHASE1 FUNCTIONALIZATION OF COMPOUNDS | Genes involved in Phase 1 - Functionalization of compounds |
0.1 | 1.0 | REACTOME DEFENSINS | Genes involved in Defensins |
0.0 | 1.0 | REACTOME DEPOSITION OF NEW CENPA CONTAINING NUCLEOSOMES AT THE CENTROMERE | Genes involved in Deposition of New CENPA-containing Nucleosomes at the Centromere |
0.1 | 0.8 | REACTOME P2Y RECEPTORS | Genes involved in P2Y receptors |
0.0 | 0.7 | REACTOME PLATELET ADHESION TO EXPOSED COLLAGEN | Genes involved in Platelet Adhesion to exposed collagen |
0.0 | 0.7 | REACTOME MYOGENESIS | Genes involved in Myogenesis |
0.0 | 0.6 | REACTOME INHIBITION OF INSULIN SECRETION BY ADRENALINE NORADRENALINE | Genes involved in Inhibition of Insulin Secretion by Adrenaline/Noradrenaline |
0.0 | 0.5 | REACTOME CASPASE MEDIATED CLEAVAGE OF CYTOSKELETAL PROTEINS | Genes involved in Caspase-mediated cleavage of cytoskeletal proteins |