avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Ptf1a | mm10_v2_chr2_+_19445632_19445663 | 0.78 | 2.7e-08 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr6_-_41314700 Show fit | 29.30 |
ENSMUST00000064324.5
|
trypsin 5 |
|
chr6_+_41458923 Show fit | 22.61 |
ENSMUST00000031910.7
|
protease, serine, 1 (trypsin 1) |
|
chr6_+_41392356 Show fit | 22.34 |
ENSMUST00000049079.7
|
predicted gene 5771 |
|
chr7_+_28540863 Show fit | 18.76 |
ENSMUST00000119180.2
|
syncollin |
|
chr6_+_41354105 Show fit | 18.51 |
ENSMUST00000072103.5
|
trypsin 10 |
|
chr6_+_41302265 Show fit | 16.94 |
ENSMUST00000031913.4
|
trypsin 4 |
|
chr7_-_131322292 Show fit | 15.52 |
ENSMUST00000046611.7
|
CUB and zona pellucida-like domains 1 |
|
chr2_+_173153048 Show fit | 7.25 |
ENSMUST00000029017.5
|
phosphoenolpyruvate carboxykinase 1, cytosolic |
|
chr6_-_69243445 Show fit | 6.43 |
ENSMUST00000101325.3
|
immunoglobulin kappa chain variable 4-71 |
|
chr1_-_90153396 Show fit | 3.53 |
ENSMUST00000113094.2
|
IQ motif containing with AAA domain |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 109.6 | GO:0007586 | digestion(GO:0007586) |
0.0 | 18.2 | GO:0006887 | exocytosis(GO:0006887) |
0.1 | 15.0 | GO:0031638 | zymogen activation(GO:0031638) |
2.4 | 7.3 | GO:0061402 | positive regulation of transcription from RNA polymerase II promoter in response to acidic pH(GO:0061402) |
0.0 | 6.4 | GO:0002377 | immunoglobulin production(GO:0002377) |
0.0 | 3.4 | GO:0038083 | peptidyl-tyrosine autophosphorylation(GO:0038083) |
1.0 | 3.0 | GO:1902283 | negative regulation of primary amine oxidase activity(GO:1902283) |
0.6 | 1.9 | GO:0008588 | release of cytoplasmic sequestered NF-kappaB(GO:0008588) |
0.4 | 1.5 | GO:0006069 | ethanol oxidation(GO:0006069) |
0.5 | 1.4 | GO:2000412 | lymphocyte migration into lymphoid organs(GO:0097021) positive regulation of thymocyte migration(GO:2000412) regulation of dendritic cell dendrite assembly(GO:2000547) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 101.5 | GO:0005615 | extracellular space(GO:0005615) |
0.2 | 18.8 | GO:0030667 | secretory granule membrane(GO:0030667) |
0.1 | 16.8 | GO:0072562 | blood microparticle(GO:0072562) |
1.0 | 15.5 | GO:0042589 | zymogen granule membrane(GO:0042589) |
0.0 | 2.6 | GO:0031234 | extrinsic component of cytoplasmic side of plasma membrane(GO:0031234) |
0.0 | 1.4 | GO:0031526 | brush border membrane(GO:0031526) |
0.0 | 0.8 | GO:0008074 | guanylate cyclase complex, soluble(GO:0008074) |
0.0 | 0.8 | GO:0000786 | nucleosome(GO:0000786) |
0.0 | 0.7 | GO:0035861 | site of double-strand break(GO:0035861) |
0.0 | 0.4 | GO:0048787 | presynaptic active zone membrane(GO:0048787) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 112.0 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.2 | 5.4 | GO:0004550 | nucleoside diphosphate kinase activity(GO:0004550) |
0.0 | 3.4 | GO:0004715 | non-membrane spanning protein tyrosine kinase activity(GO:0004715) |
0.0 | 2.9 | GO:0052689 | carboxylic ester hydrolase activity(GO:0052689) |
0.7 | 2.1 | GO:0052595 | tryptamine:oxygen oxidoreductase (deaminating) activity(GO:0052593) aminoacetone:oxygen oxidoreductase(deaminating) activity(GO:0052594) aliphatic-amine oxidase activity(GO:0052595) phenethylamine:oxygen oxidoreductase (deaminating) activity(GO:0052596) |
0.3 | 2.1 | GO:0005499 | vitamin D binding(GO:0005499) |
0.5 | 1.5 | GO:0004024 | alcohol dehydrogenase activity, zinc-dependent(GO:0004024) |
0.3 | 1.4 | GO:0008269 | JAK pathway signal transduction adaptor activity(GO:0008269) |
0.1 | 1.4 | GO:0019957 | C-C chemokine binding(GO:0019957) |
0.0 | 1.2 | GO:0005507 | copper ion binding(GO:0005507) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 23.9 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.1 | 7.3 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.1 | 3.4 | PID GLYPICAN 1PATHWAY | Glypican 1 network |
0.0 | 1.7 | PID INTEGRIN1 PATHWAY | Beta1 integrin cell surface interactions |
0.0 | 1.4 | PID IL2 1PATHWAY | IL2-mediated signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.9 | 26.1 | REACTOME DEGRADATION OF THE EXTRACELLULAR MATRIX | Genes involved in Degradation of the extracellular matrix |
0.6 | 7.3 | REACTOME ABACAVIR TRANSPORT AND METABOLISM | Genes involved in Abacavir transport and metabolism |
0.1 | 3.4 | REACTOME ANTIGEN ACTIVATES B CELL RECEPTOR LEADING TO GENERATION OF SECOND MESSENGERS | Genes involved in Antigen Activates B Cell Receptor Leading to Generation of Second Messengers |
0.0 | 1.4 | REACTOME GROWTH HORMONE RECEPTOR SIGNALING | Genes involved in Growth hormone receptor signaling |
0.0 | 1.4 | REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES | Genes involved in Chemokine receptors bind chemokines |
0.0 | 0.9 | REACTOME METABOLISM OF VITAMINS AND COFACTORS | Genes involved in Metabolism of vitamins and cofactors |
0.0 | 0.8 | REACTOME CYTOCHROME P450 ARRANGED BY SUBSTRATE TYPE | Genes involved in Cytochrome P450 - arranged by substrate type |
0.0 | 0.8 | REACTOME PEROXISOMAL LIPID METABOLISM | Genes involved in Peroxisomal lipid metabolism |
0.0 | 0.8 | REACTOME SMOOTH MUSCLE CONTRACTION | Genes involved in Smooth Muscle Contraction |
0.0 | 0.5 | REACTOME VITAMIN B5 PANTOTHENATE METABOLISM | Genes involved in Vitamin B5 (pantothenate) metabolism |