avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Rad21 | mm10_v2_chr15_-_51991679_51991760 | -0.87 | 6.6e-12 | Click! |
Smc3 | mm10_v2_chr19_+_53600377_53600435 | -0.79 | 1.1e-08 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr8_+_45069137 Show fit | 9.58 |
ENSMUST00000067984.7
|
melatonin receptor 1A |
|
chr15_+_10314102 Show fit | 8.31 |
ENSMUST00000127467.1
|
prolactin receptor |
|
chr7_-_19698383 Show fit | 8.29 |
ENSMUST00000173739.1
|
apolipoprotein E |
|
chr7_-_19698206 Show fit | 8.23 |
ENSMUST00000172808.1
ENSMUST00000174191.1 |
apolipoprotein E |
|
chr18_-_61911783 Show fit | 7.48 |
ENSMUST00000049378.8
ENSMUST00000166783.1 |
actin binding LIM protein family, member 3 |
|
chr11_+_72435565 Show fit | 7.28 |
ENSMUST00000100903.2
|
gamma-glutamyltransferase 6 |
|
chr5_+_30921556 Show fit | 6.92 |
ENSMUST00000031053.8
|
ketohexokinase |
|
chr19_+_42036025 Show fit | 6.76 |
ENSMUST00000026172.2
|
ankyrin repeat domain 2 (stretch responsive muscle) |
|
chr6_+_124570294 Show fit | 6.75 |
ENSMUST00000184647.1
|
complement component 1, r subcomponent B |
|
chr6_+_124512615 Show fit | 6.57 |
ENSMUST00000068593.7
|
complement component 1, r subcomponent A |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
4.8 | 19.2 | GO:0061625 | fructose catabolic process(GO:0006001) response to sucrose(GO:0009744) response to disaccharide(GO:0034285) fructose catabolic process to hydroxyacetone phosphate and glyceraldehyde-3-phosphate(GO:0061624) glycolytic process through fructose-1-phosphate(GO:0061625) |
5.5 | 16.5 | GO:1903000 | regulation of lipid transport across blood brain barrier(GO:1903000) positive regulation of lipid transport across blood brain barrier(GO:1903002) |
1.0 | 15.6 | GO:0030828 | positive regulation of cGMP biosynthetic process(GO:0030828) |
0.2 | 11.6 | GO:0006687 | glycosphingolipid metabolic process(GO:0006687) |
0.1 | 11.0 | GO:0006635 | fatty acid beta-oxidation(GO:0006635) |
0.2 | 10.2 | GO:0006958 | complement activation, classical pathway(GO:0006958) |
0.0 | 9.0 | GO:0035264 | multicellular organism growth(GO:0035264) |
0.1 | 8.4 | GO:1903749 | positive regulation of establishment of protein localization to mitochondrion(GO:1903749) positive regulation of protein targeting to mitochondrion(GO:1903955) |
1.4 | 8.3 | GO:0038161 | prolactin signaling pathway(GO:0038161) |
0.9 | 8.1 | GO:0035754 | B cell chemotaxis(GO:0035754) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 17.8 | GO:0043235 | receptor complex(GO:0043235) |
3.3 | 16.5 | GO:0034365 | discoidal high-density lipoprotein particle(GO:0034365) |
0.1 | 9.4 | GO:0001725 | stress fiber(GO:0001725) contractile actin filament bundle(GO:0097517) |
0.0 | 9.2 | GO:0005667 | transcription factor complex(GO:0005667) |
0.0 | 7.3 | GO:0072562 | blood microparticle(GO:0072562) |
1.4 | 7.0 | GO:0000408 | EKC/KEOPS complex(GO:0000408) |
0.0 | 6.5 | GO:0005789 | endoplasmic reticulum membrane(GO:0005789) |
0.6 | 5.8 | GO:0045298 | tubulin complex(GO:0045298) |
0.2 | 5.8 | GO:0030992 | intraciliary transport particle B(GO:0030992) |
0.1 | 5.3 | GO:0030173 | integral component of Golgi membrane(GO:0030173) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
6.4 | 19.2 | GO:0004454 | ketohexokinase activity(GO:0004454) |
0.1 | 19.2 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
5.5 | 16.5 | GO:0046911 | metal chelating activity(GO:0046911) |
3.1 | 15.6 | GO:0008502 | melatonin receptor activity(GO:0008502) |
0.0 | 13.0 | GO:0001228 | transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228) |
0.2 | 11.3 | GO:0001540 | beta-amyloid binding(GO:0001540) |
3.0 | 8.9 | GO:0004492 | methylmalonyl-CoA decarboxylase activity(GO:0004492) |
1.7 | 8.3 | GO:0004925 | prolactin receptor activity(GO:0004925) |
0.6 | 8.1 | GO:0003854 | 3-beta-hydroxy-delta5-steroid dehydrogenase activity(GO:0003854) |
0.6 | 7.3 | GO:0036374 | glutathione hydrolase activity(GO:0036374) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 9.7 | PID TCR CALCIUM PATHWAY | Calcium signaling in the CD4+ TCR pathway |
0.1 | 6.6 | PID TAP63 PATHWAY | Validated transcriptional targets of TAp63 isoforms |
0.0 | 6.6 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.1 | 6.5 | PID PTP1B PATHWAY | Signaling events mediated by PTP1B |
0.1 | 6.1 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.1 | 5.7 | NABA BASEMENT MEMBRANES | Genes encoding structural components of basement membranes |
0.1 | 4.4 | PID ECADHERIN STABILIZATION PATHWAY | Stabilization and expansion of the E-cadherin adherens junction |
0.1 | 3.6 | PID CONE PATHWAY | Visual signal transduction: Cones |
0.1 | 3.4 | SA CASPASE CASCADE | Apoptosis is mediated by caspases, cysteine proteases arranged in a proteolytic cascade. |
0.2 | 3.1 | PID P38 GAMMA DELTA PATHWAY | Signaling mediated by p38-gamma and p38-delta |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.9 | 18.7 | REACTOME HDL MEDIATED LIPID TRANSPORT | Genes involved in HDL-mediated lipid transport |
0.1 | 15.6 | REACTOME G ALPHA I SIGNALLING EVENTS | Genes involved in G alpha (i) signalling events |
0.0 | 11.4 | REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES | Genes involved in Metabolism of amino acids and derivatives |
0.4 | 8.3 | REACTOME PROLACTIN RECEPTOR SIGNALING | Genes involved in Prolactin receptor signaling |
0.6 | 8.1 | REACTOME SYNTHESIS OF BILE ACIDS AND BILE SALTS VIA 24 HYDROXYCHOLESTEROL | Genes involved in Synthesis of bile acids and bile salts via 24-hydroxycholesterol |
0.3 | 7.5 | REACTOME DCC MEDIATED ATTRACTIVE SIGNALING | Genes involved in DCC mediated attractive signaling |
0.3 | 7.4 | REACTOME CASPASE MEDIATED CLEAVAGE OF CYTOSKELETAL PROTEINS | Genes involved in Caspase-mediated cleavage of cytoskeletal proteins |
0.1 | 6.0 | REACTOME MEIOTIC SYNAPSIS | Genes involved in Meiotic Synapsis |
0.3 | 5.8 | REACTOME PYRIMIDINE CATABOLISM | Genes involved in Pyrimidine catabolism |
0.2 | 5.7 | REACTOME FATTY ACYL COA BIOSYNTHESIS | Genes involved in Fatty Acyl-CoA Biosynthesis |